Factsheet for Zm00001d002682_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d000055_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G28100.1	Zm00001d000055_P001	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12650	Sorghum	extracellular	74.0	93.76
TraesCS2A01G407300.1	Wheat	cytosol	58.92	82.37
Os04t0560400-01	Rice	extracellular, mitochondrion, plasma membrane	64.62	81.4
TraesCS2B01G425000.1	Wheat	extracellular	63.85	80.58
TraesCS2D01G404300.1	Wheat	extracellular	63.69	80.39
HORVU2Hr1G096280.1	Barley	endoplasmic reticulum	8.0	71.23
HORVU1Hr1G057300.1	Barley	cytosol, extracellular	13.08	68.55
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi	50.31	63.5
CDX77155	Canola	plastid	44.77	60.12
PGSC0003DMT400050536	Potato	cytosol	42.77	59.4
CDY30508	Canola	plastid	45.08	59.07
Bra034388.1-P	Field mustard	plastid	44.77	58.67
Solyc11g069010.1.1	Tomato	extracellular, golgi	45.23	56.76
AT2G28100.1	Thale cress	extracellular, golgi	44.0	56.52
VIT_06s0061g00480.t01	Wine grape	plastid	46.62	55.6
KRH22840	Soybean	plastid	45.54	55.33
KRH26522	Soybean	cytosol	22.62	52.88
Zm00001d021197_P001	Maize	extracellular	37.23	49.9
Zm00001d006161_P001	Maize	extracellular	36.92	49.48

Protein Annotations

KEGG:00511+3.2.1.51	EntrezGene:100192871	Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:50.3.2	UniProt:A0A1D6E3G0
GO:GO:0003674	GO:GO:0003824	GO:GO:0004560	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Galactose-bd-like_sf	InterPro:Glyco_hydro_29	InterPro:Glycoside_hydrolase_SF	InterPro:IPR008979	ProteinID:ONM15083.1	PFAM:PF01120
PANTHER:PTHR10030	PANTHER:PTHR10030:SF27	SMART:SM00812	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM
UniParc:UPI000843D1BC	EnsemblPlantsGene:Zm00001d002682	EnsemblPlants:Zm00001d002682_P001	EnsemblPlants:Zm00001d002682_T001	SEG:seg	:

Description

Alpha-L-fucosidase 1

Coordinates

chr2:+:19196343..19207627

Molecular Weight (calculated)

72563.1 Da

IEP (calculated)

5.231

GRAVY (calculated)

-0.147

Length

650 amino acids

Sequence
(BLAST)

001: MAALVPLLLA HLLLCVHGAT VTSVATPPPL PVLPVPSYAQ LRWQLSEMAL FLHFGPNTFT DSEWGTGHAD PSVFAPSALD AGQWARIAAQ GGFGRVVLTA
101: KHHDGFCLWP SALTEYSVAA SPWQGGAGDV VAELAAAARA EGLGLGLYLS PWDRHEPVYG DTIAYNEHYL GQMTELLTRY EIQINRAPTN SHRIHQSLLP
201: FSSRSLVWFS DPEVLLRWDM FRITAPSKAS KDFQIPDFQR VGQNMGNACM GVDQMLHHRS LPRVQRQISE LKFHEMLQGI TNSTPEARPP PRGEHEVFFS
301: DDMEAIHQRV ELHLVGYGDV EEVWLDGAKG DAKKMDYMFD AWFSLIHQLQ ERVVIFSDAG PDTRWVGDEA GVAGYTCWSP FNKSSVTIGH TTAEYSSSGD
401: PFGQDWVPAE CDVSIRPGWF WHASEKPKNV TTLLDIYYKS VGRNCLLILN VPPNSSGLIA DEDIQVLQEF TEIRRAIFSQ NFAANATVTA NSVRGEQDNL
501: QFAPSKVLED GIYSYWAPQE GQTCWEMLFD LGQSTSFNLL QLQEPIQLGQ RVIEFHVAIL VDELWQTIVE GTTIGYKRLL LFPVTESRYL KLTIDSARAD
601: PLISFFGVFM DPFSSIHSLQ NHVKPPRTNS NEVTMLRMAH ASVNKSIDAM

Best Arabidopsis Sequence Match ( AT2G28100.1 )
(BLAST)

001: MNSQITLFFF FFSILSLSQI SNSSSLLKPH PCPILPLPSS QQLQWQLGSM AMFLHFGPNT FTDSEWGTGK ANPSIFNPTH LNASQWVQIA KDSGFSRVIL
101: TAKHHDGFCL WPSEYTDYSV KSSQWRNGAG DVVAELASAA KEAGIGLGLY LSPWDRHEQC YGKTLEYNEF YLSQMTELLT KYGEIKEVWL DGAKGDGEKD
201: MEYFFDTWFS LIHQLQPKAV IFSDAGPDVR WIGDEAGLAG STCWSLFNRT NAKIGDTEPS YSQEGDGYGQ DWVPAECDVS IRPGWFWHAS ESPKPAVQLL
301: DIYYNSVGRN CLFLLNVPPN SSGLISEQDI KVLEEFSEMK NSIFSNNLAR KAFVNSSSIR GDQSSQFGPK NVLEEGLDKY WAPEENQNEW VLYLEFKDLV
401: SFNVLEIREP IHMGQRIASF HLETRKTGSG EWERVVSGTT VGNKRLLRFL NVVESRSLKL VVDKARTDPL ISYLGLYMDK FSGSSRNTTK ITITRTLKEE
501: QQLHDL

Arabidopsis Description

FUC1Alpha-L-fucosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW72]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.