Factsheet for HORVU1Hr1G057300.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G018030.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G28100.1	HORVU3Hr1G018030.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26522	Soybean	cytosol	41.13	18.35
EES12650	Sorghum	extracellular	68.55	16.57
Os04t0560400-01	Rice	extracellular, mitochondrion, plasma membrane	62.9	15.12
Zm00001d002682_P001	Maize	extracellular	68.55	13.08
KRH22840	Soybean	plastid	44.35	10.28
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi	41.94	10.1
PGSC0003DMT400050536	Potato	cytosol	35.48	9.4
VIT_06s0061g00480.t01	Wine grape	plastid	40.32	9.17
CDX77155	Canola	plastid	35.48	9.09
Bra034388.1-P	Field mustard	plastid	36.29	9.07
CDY30508	Canola	plastid	36.29	9.07
Solyc11g069010.1.1	Tomato	extracellular, golgi	35.48	8.49
AT2G28100.1	Thale cress	extracellular, golgi	33.06	8.1
HORVU5Hr1G080110.4	Barley	extracellular	23.39	6.02
HORVU5Hr1G086390.1	Barley	extracellular, plasma membrane	23.39	5.85
HORVU2Hr1G096280.1	Barley	endoplasmic reticulum	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU1Hr1G057300.1	EnsemblPlantsGene:HORVU1Hr1G057300	Gene3D:2.60.120.1510	GO:GO:0003674	GO:GO:0003824	GO:GO:0004560
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_29	KEGG:00511+3.2.1.51
PANTHER:PTHR10030	PANTHER:PTHR10030:SF27	UniParc:UPI000B45FD11	UniProt:A0A287FRB2	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr1H:+:418962147..418962665

Molecular Weight (calculated)

13813.9 Da

IEP (calculated)

7.681

GRAVY (calculated)

0.041

Length

124 amino acids

Sequence
(BLAST)

001: EMLFDLGRST SFNLLQLQEP IQMGQRVIEF HVDVLVGGLW QTILQGTTIG YKRLLQFPVI KARYLKLCVD SARADPLIAF VGVFMDPFSD VHGLDHEKPS
101: HTNGSEAIML RRGPAAANRS TATM

Best Arabidopsis Sequence Match ( AT2G28100.1 )
(BLAST)

001: MNSQITLFFF FFSILSLSQI SNSSSLLKPH PCPILPLPSS QQLQWQLGSM AMFLHFGPNT FTDSEWGTGK ANPSIFNPTH LNASQWVQIA KDSGFSRVIL
101: TAKHHDGFCL WPSEYTDYSV KSSQWRNGAG DVVAELASAA KEAGIGLGLY LSPWDRHEQC YGKTLEYNEF YLSQMTELLT KYGEIKEVWL DGAKGDGEKD
201: MEYFFDTWFS LIHQLQPKAV IFSDAGPDVR WIGDEAGLAG STCWSLFNRT NAKIGDTEPS YSQEGDGYGQ DWVPAECDVS IRPGWFWHAS ESPKPAVQLL
301: DIYYNSVGRN CLFLLNVPPN SSGLISEQDI KVLEEFSEMK NSIFSNNLAR KAFVNSSSIR GDQSSQFGPK NVLEEGLDKY WAPEENQNEW VLYLEFKDLV
401: SFNVLEIREP IHMGQRIASF HLETRKTGSG EWERVVSGTT VGNKRLLRFL NVVESRSLKL VVDKARTDPL ISYLGLYMDK FSGSSRNTTK ITITRTLKEE
501: QQLHDL

Arabidopsis Description

FUC1Alpha-L-fucosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW72]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.