Factsheet for Zm00001d021197_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006161_P001	Maize	extracellular	89.9	89.9
Os09t0520800-01	Rice	extracellular, vacuole	80.41	78.95
TraesCS5B01G309700.1	Wheat	extracellular	76.7	77.66
TraesCS5D01G316000.1	Wheat	extracellular	77.32	77.32
TraesCS5A01G308800.1	Wheat	extracellular, plasma membrane, plastid	76.7	77.18
TraesCS5A01G309000.1	Wheat	extracellular, golgi	76.49	76.34
TraesCS5B01G309300.1	Wheat	extracellular, plasma membrane, plastid	76.49	76.18
HORVU5Hr1G080110.4	Barley	extracellular	75.67	76.14
HORVU5Hr1G086390.1	Barley	extracellular, plasma membrane	77.53	75.81
EER99200	Sorghum	mitochondrion, plastid	87.84	74.48
GSMUA_AchrUn_...	Banana	cytosol	57.94	67.87
Solyc03g006980.2.1	Tomato	extracellular	56.49	56.38
PGSC0003DMT400079675	Potato	extracellular, vacuole	55.67	56.02
KRG91403	Soybean	nucleus	55.26	55.03
KRH35416	Soybean	nucleus	55.05	54.83
Solyc08g062280.1.1	Tomato	cytosol	16.91	45.05
Zm00001d002682_P001	Maize	extracellular	49.9	37.23
VIT_16s0022g02170.t01	Wine grape	extracellular, golgi, vacuole	57.73	29.11

Protein Annotations

KEGG:00511+3.2.1.51	Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:50.3.2	EMBL:BT084898	UniProt:C4J251
GO:GO:0003674	GO:GO:0003824	GO:GO:0004560	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	InterPro:Galactose-bd-like_sf	InterPro:Glyco_hydro_29	InterPro:Glycoside_hydrolase_SF	InterPro:IPR008979	ProteinID:ONM56488.1
PFAM:PF01120	PANTHER:PTHR10030	PANTHER:PTHR10030:SF37	SMART:SM00812	SUPFAM:SSF51445	SignalP:SignalP-noTM
UniParc:UPI0001A4C55C	EnsemblPlantsGene:Zm00001d021197	EnsemblPlants:Zm00001d021197_P001	EnsemblPlants:Zm00001d021197_T001	SEG:seg	:

Description

Alpha-L-fucosidase 1

Coordinates

chr7:-:145649789..145651701

Molecular Weight (calculated)

53627.3 Da

IEP (calculated)

7.170

GRAVY (calculated)

-0.282

Length

485 amino acids

Sequence
(BLAST)

001: MASPLLCLAA AALAVAVLVS ATEAWRATPP PLPVLPIPSA PQLRWQRREV IMFFHFGMNT FTDSEWGTGS EDPSLFRPAG LNATQWMDAA RAAGASLVIL
101: VAKHHDGFCL WPSDYTAHSV RASPWRGGRG DVVREFVGAA RARGLDAGLY LSPWDRHDQR YGEEVAYNEY YEAQLHELLT GYGSVSEIWF DGAKGKNATN
201: MTYHFQEWFQ TVKQLQRSIN IFSDDGPDVR WVGDEKGYAG TTCWSTVNRS MITIGEAGIE KYLNAGDPRG RDWVPPECDV SIRPGWFWHK NETAKPLSQL
301: LEIYYNSVGR NCVLLLNAPP NSTGLVEDAD IARLREFGAA VATVFGTDLA AGSEARASSE RGARFAARNV MDGRDDTYWA PTAEDGRRNG YWIELRRRPG
401: ARARAFNVVR IQEHVALGQR VERHAVYVDG APVANGTTVG HKRLHRLPCP VAGTTVRVWI TALRGPPLLS AVGLHYDPFV ASDTM

Best Arabidopsis Sequence Match ( AT2G28100.1 )
(BLAST)

001: MNSQITLFFF FFSILSLSQI SNSSSLLKPH PCPILPLPSS QQLQWQLGSM AMFLHFGPNT FTDSEWGTGK ANPSIFNPTH LNASQWVQIA KDSGFSRVIL
101: TAKHHDGFCL WPSEYTDYSV KSSQWRNGAG DVVAELASAA KEAGIGLGLY LSPWDRHEQC YGKTLEYNEF YLSQMTELLT KYGEIKEVWL DGAKGDGEKD
201: MEYFFDTWFS LIHQLQPKAV IFSDAGPDVR WIGDEAGLAG STCWSLFNRT NAKIGDTEPS YSQEGDGYGQ DWVPAECDVS IRPGWFWHAS ESPKPAVQLL
301: DIYYNSVGRN CLFLLNVPPN SSGLISEQDI KVLEEFSEMK NSIFSNNLAR KAFVNSSSIR GDQSSQFGPK NVLEEGLDKY WAPEENQNEW VLYLEFKDLV
401: SFNVLEIREP IHMGQRIASF HLETRKTGSG EWERVVSGTT VGNKRLLRFL NVVESRSLKL VVDKARTDPL ISYLGLYMDK FSGSSRNTTK ITITRTLKEE
501: QQLHDL

Arabidopsis Description

FUC1Alpha-L-fucosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW72]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.