Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_06s0004g07610.t01 | Wine grape | plastid | 80.6 | 26.6 |
| VIT_18s0001g12750.t01 | Wine grape | cytosol | 86.57 | 15.03 |
| TraesCS4B01G054400.1 | Wheat | cytosol | 65.67 | 11.86 |
| TraesCS4D01G054500.1 | Wheat | cytosol | 65.67 | 11.86 |
| TraesCS4A01G260200.2 | Wheat | cytosol | 65.67 | 11.8 |
| Os01t0105900-01 | Rice | cytosol | 65.67 | 11.61 |
| PGSC0003DMT400009476 | Potato | cytosol | 64.18 | 11.44 |
| Zm00001d040183_P001 | Maize | plastid | 62.69 | 11.2 |
| Solyc04g080580.2.1 | Tomato | cytosol | 62.69 | 11.17 |
| GSMUA_Achr2P22960_001 | Banana | cytosol | 11.94 | 10.67 |
| Zm00001d008406_P002 | Maize | plastid | 62.69 | 10.05 |
| KXG32133 | Sorghum | cytosol | 62.69 | 9.35 |
| HORVU4Hr1G009140.1 | Barley | plastid | 65.67 | 8.85 |
| GSMUA_Achr3P01160_001 | Banana | cytosol | 64.18 | 8.24 |
| VIT_16s0039g01580.t01 | Wine grape | cytosol | 14.93 | 2.73 |
| VIT_00s0380g00030.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:35.2 | ProteinID:CBI38980 | ProteinID:CBI38980.3 | UniProt:D7U8B6 | EMBL:FN596740 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004001 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 | GO:GO:0006167 | GO:GO:0006169 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | PANTHER:PTHR43320 |
| PANTHER:PTHR43320:SF1 | UniParc:UPI0001BE51BA | ArrayExpress:VIT_09s0070g00740 | EnsemblPlantsGene:VIT_09s0070g00740 | EnsemblPlants:VIT_09s0070g00740.t01 | : |
Description
No Description!
Coordinates
chr9:-:14324192..14325249
Molecular Weight (calculated)
7792.5 Da
IEP (calculated)
7.679
GRAVY (calculated)
-0.030
Length
67 amino acids
Sequence
(BLAST)
(BLAST)
1: MRPYLSSAVK TQAEELTKED FKGVKWLVMR YGIYNLEVIH AVIRMAKQEG VFVSLDLASF ELHNLYN
001: MVAEALPKCP EAPLVLGLQP AALIDNVAPV DWSLLDQIPG DRGGSIAVQK DELEHMLKEL DAHISVAPLK KMAGGSVTNT VRGLSVGFGV ATGIIGAYGD
101: DEQGQLFVSN MGFSGVSISR LRKKKGSTAQ CVCLVDDSGN RTMRPCLSSA VKIQADELSK EDFTGSKWLV LRYAVLNLQV IQAAIRFAKQ EGLSVSLDLA
201: SFEMVRNSKS ELRQLLESGN IDLCFANEDE AAELLRGEQE AGPEAALEFL GRHCRWAVVT LGSKGCIAKH DKEVVHISAI GETVATDATG AGDLFASGFL
301: YGLIKGLSLE ECCKVGSCSG GSVIRALGGE VTPENWQWMH KQLQLKGLPV PDIHN
101: DEQGQLFVSN MGFSGVSISR LRKKKGSTAQ CVCLVDDSGN RTMRPCLSSA VKIQADELSK EDFTGSKWLV LRYAVLNLQV IQAAIRFAKQ EGLSVSLDLA
201: SFEMVRNSKS ELRQLLESGN IDLCFANEDE AAELLRGEQE AGPEAALEFL GRHCRWAVVT LGSKGCIAKH DKEVVHISAI GETVATDATG AGDLFASGFL
301: YGLIKGLSLE ECCKVGSCSG GSVIRALGGE VTPENWQWMH KQLQLKGLPV PDIHN
Arabidopsis Description
At1g19600 [Source:UniProtKB/TrEMBL;Acc:Q9LN35]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.