Factsheet for TraesCS4A01G260200.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G054500.1	Wheat	cytosol	98.39	98.92
TraesCS4B01G054400.1	Wheat	cytosol	97.86	98.38
Zm00001d040183_P001	Maize	plastid	83.91	83.47
Os01t0105900-01	Rice	cytosol	83.11	81.79
Zm00001d008406_P002	Maize	plastid	84.18	75.12
Bra025751.1-P	Field mustard	cytosol	67.02	70.22
CDY29418	Canola	cytosol	67.02	70.22
AT1G19600.1	Thale cress	cytosol, peroxisome, plastid	66.76	70.14
CDY39367	Canola	cytosol	67.02	70.03
KXG32133	Sorghum	cytosol	82.84	68.82
KRH61143	Soybean	cytosol	64.88	68.36
VIT_09s0070g00740.t01	Wine grape	cytosol	11.8	65.67
GSMUA_Achr2P22960_001	Banana	cytosol	13.14	65.33
PGSC0003DMT400009476	Potato	cytosol	65.15	64.63
HORVU4Hr1G009140.1	Barley	plastid	85.79	64.39
KRH05844	Soybean	cytosol	64.88	64.36
Solyc04g080580.2.1	Tomato	cytosol	64.88	64.36
VIT_18s0001g12750.t01	Wine grape	cytosol	64.61	62.44
VIT_06s0004g07610.t01	Wine grape	plastid	33.24	61.08
KRH15175	Soybean	endoplasmic reticulum	64.34	59.41
KRH75060	Soybean	extracellular, mitochondrion	21.98	57.75
VIT_00s0380g00030.t01	Wine grape	cytosol	11.53	50.59
GSMUA_Achr3P01160_001	Banana	cytosol	69.71	49.81
KRH38835	Soybean	peroxisome	34.05	45.52
TraesCS1A01G288800.1	Wheat	mitochondrion	8.31	21.83
TraesCS3A01G353000.1	Wheat	mitochondrion	8.31	21.83
TraesCS5A01G473700.1	Wheat	mitochondrion	8.31	21.83
TraesCS1A01G191300.1	Wheat	mitochondrion	21.45	17.32

Protein Annotations

EnsemblPlants:TraesCS4A01G260200.2	EnsemblPlantsGene:TraesCS4A01G260200	Gene3D:3.40.1190.20	InterPro:IPR029056	InterPro:PfkB_dom	InterPro:Ribokinase-like
PANTHER:PTHR43320	PANTHER:PTHR43320:SF1	PFAM:PF00294	SEG:seg	SUPFAM:SSF53613	TIGR:cd01168
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:572830903..572834487

Molecular Weight (calculated)

39812.6 Da

IEP (calculated)

5.096

GRAVY (calculated)

-0.061

Length

373 amino acids

Sequence
(BLAST)

001: MGAEAEQQQQ QQLLPPSPQA GKADPPAVVG LQVSALIDHV ARVDWSLLDR VPGDRGGSQQ VSFEELDHIL NEVNALILPS HDDPSPVRTM AGGSVANTVR
101: GLSAGFGIST GIIGARGDDD QGILFVNNMS FSGVDLTRLR AKKGHTAQCA CLVDASGNRT MRPCLSSAVK LQANEFTKED FQGSKWLVVR YAQQNLAQII
201: EAIRVAKQEG LSVSLDLASF EMVRDYKSQL IALLETGNID LCFANEDEAR EIIGGGLTYD PEDALAFLSK HCKWAVVTLA SKGCIAKHGK QVVQVPAIGE
301: SNAVDATGAG DLFASGFLYG LVKGLPLEEC CKVGVCSGGS VVRALGGEVR PENWQWMYKQ MHAGGLLLPE LKN

Best Arabidopsis Sequence Match ( AT1G19600.1 )
(BLAST)

001: MVAEALPKCP EAPLVLGLQP AALIDNVAPV DWSLLDQIPG DRGGSIAVQK DELEHMLKEL DAHISVAPLK KMAGGSVTNT VRGLSVGFGV ATGIIGAYGD
101: DEQGQLFVSN MGFSGVSISR LRKKKGSTAQ CVCLVDDSGN RTMRPCLSSA VKIQADELSK EDFTGSKWLV LRYAVLNLQV IQAAIRFAKQ EGLSVSLDLA
201: SFEMVRNSKS ELRQLLESGN IDLCFANEDE AAELLRGEQE AGPEAALEFL GRHCRWAVVT LGSKGCIAKH DKEVVHISAI GETVATDATG AGDLFASGFL
301: YGLIKGLSLE ECCKVGSCSG GSVIRALGGE VTPENWQWMH KQLQLKGLPV PDIHN

Arabidopsis Description

At1g19600 [Source:UniProtKB/TrEMBL;Acc:Q9LN35]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.