Factsheet for GSMUA_Achr2P22960_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH75060	Soybean	extracellular, mitochondrion	34.67	18.31
VIT_06s0004g07610.t01	Wine grape	plastid	37.33	13.79
TraesCS4D01G054500.1	Wheat	cytosol	65.33	13.21
TraesCS4B01G054400.1	Wheat	cytosol	65.33	13.21
Os01t0105900-01	Rice	cytosol	66.67	13.19
TraesCS4A01G260200.2	Wheat	cytosol	65.33	13.14
Zm00001d040183_P001	Maize	plastid	65.33	13.07
Bra025751.1-P	Field mustard	cytosol	61.33	12.92
CDY29418	Canola	cytosol	61.33	12.92
CDY39367	Canola	cytosol	61.33	12.89
KRH61143	Soybean	cytosol	60.0	12.71
AT1G19600.1	Thale cress	cytosol, peroxisome, plastid	60.0	12.68
KRH05844	Soybean	cytosol	62.67	12.5
PGSC0003DMT400009476	Potato	cytosol	61.33	12.23
Solyc04g080580.2.1	Tomato	cytosol	60.0	11.97
VIT_09s0070g00740.t01	Wine grape	cytosol	10.67	11.94
Zm00001d008406_P002	Maize	plastid	65.33	11.72
KRH15175	Soybean	endoplasmic reticulum	62.67	11.63
VIT_18s0001g12750.t01	Wine grape	cytosol	58.67	11.4
KXG32133	Sorghum	cytosol	65.33	10.91
GSMUA_Achr3P01160_001	Banana	cytosol	73.33	10.54
HORVU4Hr1G009140.1	Barley	plastid	65.33	9.86
KRH38835	Soybean	peroxisome	25.33	6.81
GSMUA_Achr11P...	Banana	plastid	21.33	3.38
VIT_00s0380g00030.t01	Wine grape	cytosol	1.33	1.18

Protein Annotations

EnsemblPlants:GSMUA_Achr2P22960_001	EnsemblPlants:GSMUA_Achr2T22960_001	EnsemblPlantsGene:GSMUA_Achr2G22960_001	Gene3D:3.40.1190.20	InterPro:IPR029056	InterPro:PfkB_dom
InterPro:Ribokinase-like	PANTHER:PTHR43320	PANTHER:PTHR43320:SF1	PFAM:PF00294	SUPFAM:SSF53613	UniParc:UPI0002948F4B
UniProt:M0SAD7	MapMan:35.2	:	:	:	:

Description

kinase, pfkB family, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G22960_001]

Coordinates

chr2:+:21843869..21844164

Molecular Weight (calculated)

8083.9 Da

IEP (calculated)

10.934

GRAVY (calculated)

-0.315

Length

75 amino acids

Sequence
(BLAST)

1: MAAGFGISGG RIGACGDDKR ARLFIENMSD SDVDISRMRR KKGSTGQCAC LVDAGGNRTM RPCLSTAVMF PVRRR

Best Arabidopsis Sequence Match ( AT1G19600.1 )
(BLAST)

001: MVAEALPKCP EAPLVLGLQP AALIDNVAPV DWSLLDQIPG DRGGSIAVQK DELEHMLKEL DAHISVAPLK KMAGGSVTNT VRGLSVGFGV ATGIIGAYGD
101: DEQGQLFVSN MGFSGVSISR LRKKKGSTAQ CVCLVDDSGN RTMRPCLSSA VKIQADELSK EDFTGSKWLV LRYAVLNLQV IQAAIRFAKQ EGLSVSLDLA
201: SFEMVRNSKS ELRQLLESGN IDLCFANEDE AAELLRGEQE AGPEAALEFL GRHCRWAVVT LGSKGCIAKH DKEVVHISAI GETVATDATG AGDLFASGFL
301: YGLIKGLSLE ECCKVGSCSG GSVIRALGGE VTPENWQWMH KQLQLKGLPV PDIHN

Arabidopsis Description

At1g19600 [Source:UniProtKB/TrEMBL;Acc:Q9LN35]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.