CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g07610.t01	Wine grape	plastid	46.95	64.53
VIT_00s0380g00030.t01	Wine grape	cytosol	19.35	63.53
KRH75060	Soybean	extracellular, mitochondrion	26.16	51.41
KRH05844	Soybean	cytosol	62.37	46.28
KRH61143	Soybean	cytosol	56.63	44.63
KRH15175	Soybean	endoplasmic reticulum	63.8	44.06
AT1G19600.1	Thale cress	cytosol, peroxisome, plastid	50.9	40.0
Bra025751.1-P	Field mustard	cytosol	50.54	39.61
CDY29418	Canola	cytosol	50.54	39.61
CDY39367	Canola	cytosol	50.54	39.5
Solyc04g080580.2.1	Tomato	cytosol	52.33	38.83
PGSC0003DMT400009476	Potato	cytosol	51.61	38.3
Zm00001d040183_P001	Maize	plastid	45.88	34.13
TraesCS4A01G260200.2	Wheat	cytosol	45.52	34.05
Os01t0105900-01	Rice	cytosol	46.24	34.04
TraesCS4B01G054400.1	Wheat	cytosol	45.16	33.96
TraesCS4D01G054500.1	Wheat	cytosol	45.16	33.96
Zm00001d008406_P002	Maize	plastid	45.52	30.38
KXG32133	Sorghum	cytosol	45.52	28.29
GSMUA_Achr2P22960_001	Banana	cytosol	6.81	25.33
GSMUA_Achr3P01160_001	Banana	cytosol	47.31	25.29
HORVU4Hr1G009140.1	Barley	plastid	44.44	24.95
KRH29306	Soybean	plastid	19.71	12.33
KRH24012	Soybean	plastid	18.28	11.06

Protein Annotations

EMBL:ACUP02005882	EnsemblPlants:KRH38835	EnsemblPlantsGene:GLYMA_09G161200	Gene3D:3.40.1190.20	InterPro:IPR029056	InterPro:PfkB_dom
InterPro:Ribokinase-like	PANTHER:PTHR43320	PANTHER:PTHR43320:SF1	PFAM:PF00294	ProteinID:KRH38835	ProteinID:KRH38835.1
SUPFAM:SSF53613	UniParc:UPI00023C8851	UniProt:A0A0R0IF88	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr9:+:38542538..38545334

Molecular Weight (calculated)

30786.1 Da

IEP (calculated)

6.051

GRAVY (calculated)

-0.037

Length

279 amino acids

Sequence
(BLAST)

001: MELTSLDSEE ERTHSIECVC LVDDLGNRTM RPCLSNAVKI QAEELTKEDF KGSKWLVLRY AILNLEVIKA AILLAKQEGL LVSLDLASFE MVRNFKQPLL
101: KILESGNIDL CFANEDEATE LLRGEQNADP VTAVEFLAKY CQWAVVTLGP NGCIAKYGNE IARVPAIGEA KATDATGAGD LFASGFLYGV IKGLSLEECC
201: KVGACSYEAP TLDTIRTRTR GYRTLIRTRV GYRTQQGTGV FVLHRHAIVG LLFALWRRSH FEELPLNVQT NANKGSSHA

Best Arabidopsis Sequence Match ( AT1G19600.1 )
(BLAST)

001: MVAEALPKCP EAPLVLGLQP AALIDNVAPV DWSLLDQIPG DRGGSIAVQK DELEHMLKEL DAHISVAPLK KMAGGSVTNT VRGLSVGFGV ATGIIGAYGD
101: DEQGQLFVSN MGFSGVSISR LRKKKGSTAQ CVCLVDDSGN RTMRPCLSSA VKIQADELSK EDFTGSKWLV LRYAVLNLQV IQAAIRFAKQ EGLSVSLDLA
201: SFEMVRNSKS ELRQLLESGN IDLCFANEDE AAELLRGEQE AGPEAALEFL GRHCRWAVVT LGSKGCIAKH DKEVVHISAI GETVATDATG AGDLFASGFL
301: YGLIKGLSLE ECCKVGSCSG GSVIRALGGE VTPENWQWMH KQLQLKGLPV PDIHN

Arabidopsis Description

At1g19600 [Source:UniProtKB/TrEMBL;Acc:Q9LN35]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.