CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH05071
KRH23958
KRH39841
KRH52520
KRH61848

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G27600.1	KRH23958	AT4G25200.1	21798944
AT4G27600.1	KRH39841	AT4G25200.1	21798944
AT4G27600.1	KRH05071	AT4G32570.1	21798944
AT4G27600.1	KRH52520	AT4G32570.1	21798944
AT4G27600.1	KRH61848	AT4G32570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0039g01580.t01	Wine grape	cytosol	64.57	78.69
KRH24012	Soybean	plastid	80.27	77.66
CDY56323	Canola	cytosol	61.21	71.84
GSMUA_Achr11P...	Banana	plastid	65.47	61.6
CDX89233	Canola	plastid	63.45	61.52
CDY29847	Canola	plastid	62.78	61.4
Bra026335.1-P	Field mustard	plastid	63.23	61.3
Bra019040.1-P	Field mustard	plastid	62.11	60.61
Zm00001d047033_P001	Maize	plastid	19.28	60.56
AT4G27600.1	Thale cress	plastid	63.23	59.87
Zm00001d047032_P001	Maize	mitochondrion, plastid	23.09	59.2
TraesCS1D01G195000.1	Wheat	mitochondrion, plastid	60.76	58.66
TraesCS1A01G191300.1	Wheat	mitochondrion	60.54	58.44
Zm00001d030048_P001	Maize	plastid	59.87	58.3
TraesCS1B01G206200.1	Wheat	mitochondrion, plastid	60.31	58.23
Os10t0573000-01	Rice	mitochondrion	58.97	57.42
EER94451	Sorghum	plastid	59.87	57.3
PGSC0003DMT400068057	Potato	plastid	62.78	56.57
Solyc03g097210.2.1	Tomato	plastid	61.44	56.49
HORVU0Hr1G000280.1	Barley	plastid	60.76	53.24
KRH61143	Soybean	cytosol	18.83	23.73
KRH05844	Soybean	cytosol	19.51	23.14
KRH15175	Soybean	endoplasmic reticulum	19.28	21.29
KRH75060	Soybean	extracellular, mitochondrion	6.28	19.72
KRH38835	Soybean	peroxisome	12.33	19.71

Protein Annotations

EntrezGene:100809829	Gene3D:3.30.1110.10	Gene3D:3.40.1190.20	MapMan:35.2	EMBL:ACUP02006797	InterPro:Carboh/pur_kinase_PfkB_CS
EnsemblPlantsGene:GLYMA_11G108900	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740	GO:GO:0016773	InterPro:IPR029056
UniProt:K7LP39	EnsemblPlants:KRH29306	ProteinID:KRH29306	ProteinID:KRH29306.1	PFAM:PF00294	ScanProsite:PS00584
PANTHER:PTHR43085	PANTHER:PTHR43085:SF1	InterPro:PfkB_dom	InterPro:Ribokinase-like	SUPFAM:SSF53613	UniParc:UPI000233CB2A
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:8299154..8302660

Molecular Weight (calculated)

47770.7 Da

IEP (calculated)

5.060

GRAVY (calculated)

-0.046

Length

446 amino acids

Sequence
(BLAST)

001: MSLSLLRIYS SPHLLSSSLF FPTPPLSSFL PKLPNAPRTP HIVLCHRRDA SSASKQRVPE DTEYEQPMRT SYDDDEEEEE EFLGSLVLPE RWDVLGLGQA
101: MVDFSGMVDD NFLKNLGLEK GTRKVVNHEE RGRVLQAMDG CSYKAAAGGS LSNTLVALAR LASRSQKVPA INVAMTGSVG SDLLGGFYRE KLRRANVQFL
201: SAPMKDGTTG TVIVLTTPDA QRTMLAYQGT SSTVNYDASL ASAVSKTNIL VVEGYLFELP DTIKAITKAC EKARTNGALV AITASDVSCI ERHFDDFWEI
301: IGNCVDLVFA NGDEARALCN FEAKESAASA ARYLSHFVPL ASVTDGPTGS YIGVKGEAVY IPPSPCVPVD TCGAGDAYAS GILYGLLRGI SDLRSIGSLA
401: AKVAATVVGQ QGTRLRISDA VKLAESFEFQ LDSSSSVGTD HNISSV

Best Arabidopsis Sequence Match ( AT4G27600.1 )
(BLAST)

001: MAFSLLSPIP TSASLFFTLS AITASNNASS SSLSRLYSLY HPKGTLRTRT ATSFFGASGN LRIVSMAENR QLVCRIGGGA GAELDDMDEG EIQRIGNEDE
101: DDDEFIQVHA NNSSAASPER WDVLGLGQAM VDFSGVVDDE FLKKLGLEKG TRKLINHEER GKLLQAMDGC SYKAAAGGSL SNTLVALARL GSQSICDRPL
201: NVAMAGSIGG DPLGSFYGTK LRRANVNFLS APIKDGTTGT VIVLTTPDAQ RTMLAYQGTS SVVNYDSCLA SLIAKTNVFV VEGYLFELPD TIRTITKACE
301: EAHRNGALVA VTASDVSCIE RHYDDFWDIV GNYADIVFAN SDEARAFCHF SAEESPISAT RYMSHFVPFV SVTDGINGSY IGVKGEAIYI PPSPCVPVDT
401: CGAGDAYASG ILYGILRGVS DLKGMGDMAA TIAATVVGQQ GTRLRVQDAV ELARSHAFRL NGSGVRTDVG S

Arabidopsis Description

NARA5AT4g27600/T29A15_90 [Source:UniProtKB/TrEMBL;Acc:Q940Y6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.