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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY56323 Canola cytosol 72.4 89.74
VIT_16s0039g01580.t01 Wine grape cytosol 63.06 81.15
Bra019040.1-P Field mustard plastid 75.58 77.9
CDY29847 Canola plastid 74.95 77.41
CDX89233 Canola plastid 73.04 74.78
Bra026335.1-P Field mustard plastid 72.82 74.57
KRH29306 Soybean plastid 59.87 63.23
KRH24012 Soybean plastid 60.3 61.61
Zm00001d047033_P001 Maize plastid 18.47 61.27
GSMUA_Achr11P... Banana plastid 61.15 60.76
Zm00001d047032_P001 Maize mitochondrion, plastid 22.29 60.34
EER94451 Sorghum plastid 59.66 60.3
Zm00001d030048_P001 Maize plastid 58.6 60.26
Solyc03g097210.2.1 Tomato plastid 61.78 60.0
PGSC0003DMT400068057 Potato plastid 62.84 59.8
Os10t0573000-01 Rice mitochondrion 56.48 58.08
TraesCS1A01G191300.1 Wheat mitochondrion 56.26 57.36
TraesCS1D01G195000.1 Wheat mitochondrion, plastid 56.26 57.36
TraesCS1B01G206200.1 Wheat mitochondrion, plastid 56.05 57.14
HORVU0Hr1G000280.1 Barley plastid 56.05 51.87
AT1G19600.1 Thale cress cytosol, peroxisome, plastid 17.2 22.82
Protein Annotations
Gene3D:3.30.1110.10Gene3D:3.40.1190.20MapMan:35.2EntrezGene:828871UniProt:A0A178UTR0ProteinID:AEE85364.1
ArrayExpress:AT4G27600EnsemblPlantsGene:AT4G27600RefSeq:AT4G27600TAIR:AT4G27600RefSeq:AT4G27600-TAIR-GEnsemblPlants:AT4G27600.1
TAIR:AT4G27600.1EMBL:AY052355EMBL:AY059658InterPro:Carboh/pur_kinase_PfkB_CSGO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150GO:GO:0008152
GO:GO:0009507GO:GO:0009536GO:GO:0009987GO:GO:0015979GO:GO:0016301GO:GO:0016310
GO:GO:0016740GO:GO:0016773InterPro:IPR029056Symbol:NARA5RefSeq:NP_567780.1ProteinID:OAO97005.1
PFAM:PF00294PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001016
PO:PO:0001017PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022PO:PO:0025195PO:PO:0025281ScanProsite:PS00584PANTHER:PTHR43085
PANTHER:PTHR43085:SF1InterPro:PfkB_domUniProt:Q940Y6InterPro:Ribokinase-likeSUPFAM:SSF53613UniParc:UPI00000A429C
SEG:seg:::::
Description
NARA5AT4g27600/T29A15_90 [Source:UniProtKB/TrEMBL;Acc:Q940Y6]
Coordinates
chr4:-:13782213..13785134
Molecular Weight (calculated)
50035.1 Da
IEP (calculated)
4.875
GRAVY (calculated)
-0.006
Length
471 amino acids
Sequence
(BLAST)
001: MAFSLLSPIP TSASLFFTLS AITASNNASS SSLSRLYSLY HPKGTLRTRT ATSFFGASGN LRIVSMAENR QLVCRIGGGA GAELDDMDEG EIQRIGNEDE
101: DDDEFIQVHA NNSSAASPER WDVLGLGQAM VDFSGVVDDE FLKKLGLEKG TRKLINHEER GKLLQAMDGC SYKAAAGGSL SNTLVALARL GSQSICDRPL
201: NVAMAGSIGG DPLGSFYGTK LRRANVNFLS APIKDGTTGT VIVLTTPDAQ RTMLAYQGTS SVVNYDSCLA SLIAKTNVFV VEGYLFELPD TIRTITKACE
301: EAHRNGALVA VTASDVSCIE RHYDDFWDIV GNYADIVFAN SDEARAFCHF SAEESPISAT RYMSHFVPFV SVTDGINGSY IGVKGEAIYI PPSPCVPVDT
401: CGAGDAYASG ILYGILRGVS DLKGMGDMAA TIAATVVGQQ GTRLRVQDAV ELARSHAFRL NGSGVRTDVG S
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.