Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT4G27600.1 | KRH23958 | AT4G25200.1 | 21798944 |
AT4G27600.1 | KRH39841 | AT4G25200.1 | 21798944 |
AT4G27600.1 | KRH05071 | AT4G32570.1 | 21798944 |
AT4G27600.1 | KRH52520 | AT4G32570.1 | 21798944 |
AT4G27600.1 | KRH61848 | AT4G32570.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH29306 | Soybean | plastid | 77.66 | 80.27 |
VIT_16s0039g01580.t01 | Wine grape | cytosol | 62.04 | 78.14 |
CDY56323 | Canola | cytosol | 60.3 | 73.16 |
CDY29847 | Canola | plastid | 63.12 | 63.82 |
Bra019040.1-P | Field mustard | plastid | 62.91 | 63.46 |
CDX89233 | Canola | plastid | 60.95 | 61.09 |
Bra026335.1-P | Field mustard | plastid | 60.74 | 60.87 |
Zm00001d047033_P001 | Maize | plastid | 18.66 | 60.56 |
GSMUA_Achr11P... | Banana | plastid | 62.04 | 60.34 |
AT4G27600.1 | Thale cress | plastid | 61.61 | 60.3 |
Zm00001d030048_P001 | Maize | plastid | 58.57 | 58.95 |
Zm00001d047032_P001 | Maize | mitochondrion, plastid | 22.13 | 58.62 |
Os10t0573000-01 | Rice | mitochondrion | 57.92 | 58.3 |
TraesCS1A01G191300.1 | Wheat | mitochondrion | 58.35 | 58.23 |
TraesCS1D01G195000.1 | Wheat | mitochondrion, plastid | 58.13 | 58.01 |
TraesCS1B01G206200.1 | Wheat | mitochondrion, plastid | 57.92 | 57.79 |
Solyc03g097210.2.1 | Tomato | plastid | 60.52 | 57.53 |
EER94451 | Sorghum | plastid | 58.13 | 57.51 |
PGSC0003DMT400068057 | Potato | plastid | 61.17 | 56.97 |
HORVU0Hr1G000280.1 | Barley | plastid | 58.13 | 52.65 |
KRH61143 | Soybean | cytosol | 18.0 | 23.45 |
KRH05844 | Soybean | cytosol | 19.09 | 23.4 |
KRH15175 | Soybean | endoplasmic reticulum | 18.87 | 21.53 |
KRH75060 | Soybean | extracellular, mitochondrion | 6.07 | 19.72 |
KRH38835 | Soybean | peroxisome | 11.06 | 18.28 |
Protein Annotations
EMBL:ACUP02007166 | EnsemblPlants:KRH24012 | EnsemblPlantsGene:GLYMA_12G016500 | EntrezGene:100816996 | Gene3D:3.40.1190.20 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0016740 | GO:GO:0016773 | InterPro:Carboh/pur_kinase_PfkB_CS | InterPro:IPR029056 | InterPro:PfkB_dom |
InterPro:Ribokinase-like | PANTHER:PTHR43085 | PANTHER:PTHR43085:SF1 | PFAM:PF00294 | ProteinID:KRH24012 | ProteinID:KRH24012.1 |
ScanProsite:PS00584 | SUPFAM:SSF53613 | UniParc:UPI000233CEA8 | UniProt:I1LP63 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr12:-:1169676..1172906
Molecular Weight (calculated)
48887.8 Da
IEP (calculated)
4.662
GRAVY (calculated)
-0.012
Length
461 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMSLSLLRI FSSPHLSTSL FFPTPTLSSL CPSFLSKLPN APSPLIVLCH RDASASKQGH LGVPEGAERD SGSEEDDDAV EQPMRASYDD DEDEEEGALS
101: SLVFPERWDV LGLGQAMVDF SGMVDDNFLK NLGLEKGTRK VVNHEERGRV LQAMDGCSYK AAAGGSLSNT LVALARLGSR SEKVPAINVA MTGSVGSDLL
201: GGFYREKLRR ANVQFLSAPI KDGTTGTVIV LTTPDAQRTM LAYQGTSSTV NYDASLANAV SKTNILVVEG YLFELPDTIK TITKACEKAR SNGALVAITA
301: SDVSCIERHF DDFWEIIGNC VDLVFANGNE ARALCNFEAK ESAASAARYL SHFVPLVSVT DGPTGSYIGV KGEAVYIPPS PCVPVDTCGA GDAYASGILY
401: GLLRGISDLR SIGSLAAKVA ATVVGQQGTR LRISDAVKLA ESFEFQLDSS SVGTDHNISS V
101: SLVFPERWDV LGLGQAMVDF SGMVDDNFLK NLGLEKGTRK VVNHEERGRV LQAMDGCSYK AAAGGSLSNT LVALARLGSR SEKVPAINVA MTGSVGSDLL
201: GGFYREKLRR ANVQFLSAPI KDGTTGTVIV LTTPDAQRTM LAYQGTSSTV NYDASLANAV SKTNILVVEG YLFELPDTIK TITKACEKAR SNGALVAITA
301: SDVSCIERHF DDFWEIIGNC VDLVFANGNE ARALCNFEAK ESAASAARYL SHFVPLVSVT DGPTGSYIGV KGEAVYIPPS PCVPVDTCGA GDAYASGILY
401: GLLRGISDLR SIGSLAAKVA ATVVGQQGTR LRISDAVKLA ESFEFQLDSS SVGTDHNISS V
001: MAFSLLSPIP TSASLFFTLS AITASNNASS SSLSRLYSLY HPKGTLRTRT ATSFFGASGN LRIVSMAENR QLVCRIGGGA GAELDDMDEG EIQRIGNEDE
101: DDDEFIQVHA NNSSAASPER WDVLGLGQAM VDFSGVVDDE FLKKLGLEKG TRKLINHEER GKLLQAMDGC SYKAAAGGSL SNTLVALARL GSQSICDRPL
201: NVAMAGSIGG DPLGSFYGTK LRRANVNFLS APIKDGTTGT VIVLTTPDAQ RTMLAYQGTS SVVNYDSCLA SLIAKTNVFV VEGYLFELPD TIRTITKACE
301: EAHRNGALVA VTASDVSCIE RHYDDFWDIV GNYADIVFAN SDEARAFCHF SAEESPISAT RYMSHFVPFV SVTDGINGSY IGVKGEAIYI PPSPCVPVDT
401: CGAGDAYASG ILYGILRGVS DLKGMGDMAA TIAATVVGQQ GTRLRVQDAV ELARSHAFRL NGSGVRTDVG S
101: DDDEFIQVHA NNSSAASPER WDVLGLGQAM VDFSGVVDDE FLKKLGLEKG TRKLINHEER GKLLQAMDGC SYKAAAGGSL SNTLVALARL GSQSICDRPL
201: NVAMAGSIGG DPLGSFYGTK LRRANVNFLS APIKDGTTGT VIVLTTPDAQ RTMLAYQGTS SVVNYDSCLA SLIAKTNVFV VEGYLFELPD TIRTITKACE
301: EAHRNGALVA VTASDVSCIE RHYDDFWDIV GNYADIVFAN SDEARAFCHF SAEESPISAT RYMSHFVPFV SVTDGINGSY IGVKGEAIYI PPSPCVPVDT
401: CGAGDAYASG ILYGILRGVS DLKGMGDMAA TIAATVVGQQ GTRLRVQDAV ELARSHAFRL NGSGVRTDVG S
Arabidopsis Description
NARA5AT4g27600/T29A15_90 [Source:UniProtKB/TrEMBL;Acc:Q940Y6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.