Factsheet for Bra019040.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra011357.1-P
Bra013872.1-P
Bra040086.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G27600.1	Bra013872.1-P	AT4G25200.1	21798944
AT4G27600.1	Bra011357.1-P	AT4G32570.1	21798944
AT4G27600.1	Bra040086.1-P	AT4G32570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56323	Canola	cytosol	80.96	97.37
CDY29847	Canola	plastid	96.5	96.71
VIT_16s0039g01580.t01	Wine grape	cytosol	64.55	80.6
AT4G27600.1	Thale cress	plastid	77.9	75.58
Bra026335.1-P	Field mustard	plastid	75.93	75.43
KRH24012	Soybean	plastid	63.46	62.91
KRH29306	Soybean	plastid	60.61	62.11
GSMUA_Achr11P...	Banana	plastid	63.68	61.39
Zm00001d047033_P001	Maize	plastid	18.82	60.56
Zm00001d047032_P001	Maize	mitochondrion, plastid	22.54	59.2
EER94451	Sorghum	plastid	60.18	59.01
PGSC0003DMT400068057	Potato	plastid	63.9	58.99
TraesCS1A01G191300.1	Wheat	mitochondrion	59.3	58.66
TraesCS1B01G206200.1	Wheat	mitochondrion, plastid	59.3	58.66
TraesCS1D01G195000.1	Wheat	mitochondrion, plastid	59.3	58.66
Os10t0573000-01	Rice	mitochondrion	58.64	58.52
Zm00001d030048_P001	Maize	plastid	58.42	58.3
Solyc03g097210.2.1	Tomato	plastid	61.27	57.73
HORVU0Hr1G000280.1	Barley	plastid	58.86	52.85
Bra025751.1-P	Field mustard	cytosol	16.85	21.63

Protein Annotations

EnsemblPlants:Bra019040.1	EnsemblPlants:Bra019040.1-P	EnsemblPlantsGene:Bra019040	Gene3D:3.40.1190.20	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016773	InterPro:Carboh/pur_kinase_PfkB_CS	InterPro:IPR029056	InterPro:PfkB_dom	InterPro:Ribokinase-like
PANTHER:PTHR43085	PANTHER:PTHR43085:SF1	PFAM:PF00294	ScanProsite:PS00584	SEG:seg	SUPFAM:SSF53613
UniParc:UPI0002540B33	UniProt:M4DR97	MapMan:35.2	:	:	:

Description

AT4G27600 (E=2e-198) | pfkB-type carbohydrate kinase family protein

Coordinates

chrA03:-:26594583..26596402

Molecular Weight (calculated)

48669.3 Da

IEP (calculated)

4.685

GRAVY (calculated)

-0.077

Length

457 amino acids

Sequence
(BLAST)

001: MAALSLLSPI PSSASLPPIY SLYHFKGTLQ SNKTSSTSIS GGFRSSWNLR IDSKAGKRQL GLMVSRNGGG GELDDMDEGQ IENIGGQDED DEEWTQAHAP
101: SSSSSPERWD VLGLGQAMVD FSGVVDDAFL EKLDLEKGTR KLINHEERGR VLQAMDGCSY KAAAGGSLSN TLVALARLGC PSITDRPLNV AMAGSIAGDP
201: LGSFYRTKLR RANVNFLSAP IMDGTTGTVI VLTTPDAQRT MLAYQGTSSV VNYDSCLASL ISKTNVFVVE GYLFELPDTI RTITKACEEA HRNGALVAVT
301: ASDVSCIERH YDDFWDIVGN YADIIFANSD EARAFCHFSA EESPISATRY LSHFVPFVSV TDGINGSYIG AKGEAIYIPP SPCVPVDTCG AGDAYASGIL
401: YGILRGVTDL KGMGELAATI AATVVGQQGT RLRVQDAVEL ARSHDFRLNS VGTDVGS

Best Arabidopsis Sequence Match ( AT4G27600.1 )
(BLAST)

001: MAFSLLSPIP TSASLFFTLS AITASNNASS SSLSRLYSLY HPKGTLRTRT ATSFFGASGN LRIVSMAENR QLVCRIGGGA GAELDDMDEG EIQRIGNEDE
101: DDDEFIQVHA NNSSAASPER WDVLGLGQAM VDFSGVVDDE FLKKLGLEKG TRKLINHEER GKLLQAMDGC SYKAAAGGSL SNTLVALARL GSQSICDRPL
201: NVAMAGSIGG DPLGSFYGTK LRRANVNFLS APIKDGTTGT VIVLTTPDAQ RTMLAYQGTS SVVNYDSCLA SLIAKTNVFV VEGYLFELPD TIRTITKACE
301: EAHRNGALVA VTASDVSCIE RHYDDFWDIV GNYADIVFAN SDEARAFCHF SAEESPISAT RYMSHFVPFV SVTDGINGSY IGVKGEAIYI PPSPCVPVDT
401: CGAGDAYASG ILYGILRGVS DLKGMGDMAA TIAATVVGQQ GTRLRVQDAV ELARSHAFRL NGSGVRTDVG S

Arabidopsis Description

NARA5AT4g27600/T29A15_90 [Source:UniProtKB/TrEMBL;Acc:Q940Y6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.