Factsheet for Solyc03g097210.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc06g065650.2.1
Solyc08g078700.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G27600.1	Solyc08g078700.2.1	AT4G25200.1	21798944
AT4G27600.1	Solyc06g065650.2.1	AT4G32570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400068057	Potato	plastid	88.87	87.07
VIT_16s0039g01580.t01	Wine grape	cytosol	60.21	79.78
CDY56323	Canola	cytosol	56.29	71.84
Zm00001d047033_P001	Maize	plastid	18.97	64.79
GSMUA_Achr11P...	Banana	plastid	61.44	62.87
AT4G27600.1	Thale cress	plastid	60.0	61.78
KRH29306	Soybean	plastid	56.49	61.44
CDY29847	Canola	plastid	57.73	61.4
Bra019040.1-P	Field mustard	plastid	57.73	61.27
KRH24012	Soybean	plastid	57.53	60.52
CDX89233	Canola	plastid	57.32	60.43
Bra026335.1-P	Field mustard	plastid	57.11	60.22
EER94451	Sorghum	plastid	57.73	60.09
Zm00001d030048_P001	Maize	plastid	56.49	59.83
Os10t0573000-01	Rice	mitochondrion	54.43	57.64
TraesCS1B01G206200.1	Wheat	mitochondrion, plastid	54.85	57.58
TraesCS1A01G191300.1	Wheat	mitochondrion	54.64	57.36
TraesCS1D01G195000.1	Wheat	mitochondrion, plastid	54.64	57.36
Zm00001d047032_P001	Maize	mitochondrion, plastid	20.21	56.32
HORVU0Hr1G000280.1	Barley	plastid	54.23	51.67
Solyc04g080580.2.1	Tomato	cytosol	18.35	23.67

Protein Annotations

Gene3D:3.40.1190.20	MapMan:35.2	InterPro:Carboh/pur_kinase_PfkB_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0015979	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0016773	InterPro:IPR029056	UniProt:K4BJD8	PFAM:PF00294	PRINTS:PR00990	ScanProsite:PS00584
PANTHER:PTHR43085	PANTHER:PTHR43085:SF1	InterPro:PfkB_dom	InterPro:Ribo/fructo_kinase	InterPro:Ribokinase-like	SUPFAM:SSF53613
EnsemblPlantsGene:Solyc03g097210.2	EnsemblPlants:Solyc03g097210.2.1	UniParc:UPI00027681AE	SEG:seg	:	:

Description

No Description!

Coordinates

chr3:+:59524378..59528657

Molecular Weight (calculated)

51511.0 Da

IEP (calculated)

4.818

GRAVY (calculated)

-0.123

Length

485 amino acids

Sequence
(BLAST)

001: MSFSLISLSS SSSSTVSRTF PSFFSSETSS PPSSLLTLLR NQSNFSHVAS SYRNFGSGSC SFVSSGCSMS AADYVVPRAF SSSFGSEFSS SGRNSDGESS
101: EVRSGENDEQ GAETDDEDQV LIVDEEDAGY SNSDLPQRWD VLGLGQAMVD FSGMVDNEFL ERLGLEKGTR KVVNHEERGK VLSAMDGCSY KAAAGGSLSN
201: SLVALARLGG QPIAGPALNV ALAGSIGSDP LGGFYRSKLR RANVNFLSAP VKDGTTGTVI VLTTSDAQRT MLAYQGTSSR INYDPCLAEA ITKTNILVVE
301: GYLFELPDTV RTISKACKEA RKNGALVAIT ASDVSCIERH YDDYWEIMAN YADIVFANSE EAKAFCHFSS NESPLSATRY LSHFVPLVSV TDGPKGSYIG
401: VKGEAIYIPP SPCTPVDTCG AGDAYASGIL YGILRGVSDL KNMGSIASKV ASVVVGQQGT RLRVHDAIGL SESFSVHCRN STFWS

Best Arabidopsis Sequence Match ( AT4G27600.1 )
(BLAST)

001: MAFSLLSPIP TSASLFFTLS AITASNNASS SSLSRLYSLY HPKGTLRTRT ATSFFGASGN LRIVSMAENR QLVCRIGGGA GAELDDMDEG EIQRIGNEDE
101: DDDEFIQVHA NNSSAASPER WDVLGLGQAM VDFSGVVDDE FLKKLGLEKG TRKLINHEER GKLLQAMDGC SYKAAAGGSL SNTLVALARL GSQSICDRPL
201: NVAMAGSIGG DPLGSFYGTK LRRANVNFLS APIKDGTTGT VIVLTTPDAQ RTMLAYQGTS SVVNYDSCLA SLIAKTNVFV VEGYLFELPD TIRTITKACE
301: EAHRNGALVA VTASDVSCIE RHYDDFWDIV GNYADIVFAN SDEARAFCHF SAEESPISAT RYMSHFVPFV SVTDGINGSY IGVKGEAIYI PPSPCVPVDT
401: CGAGDAYASG ILYGILRGVS DLKGMGDMAA TIAATVVGQQ GTRLRVQDAV ELARSHAFRL NGSGVRTDVG S

Arabidopsis Description

NARA5AT4g27600/T29A15_90 [Source:UniProtKB/TrEMBL;Acc:Q940Y6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.