Factsheet for Solyc04g080580.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400009476	Potato	cytosol	96.81	96.81
KRH61143	Soybean	cytosol	68.62	72.88
KRH05844	Soybean	cytosol	69.95	69.95
AT1G19600.1	Thale cress	cytosol, peroxisome, plastid	65.43	69.3
Bra025751.1-P	Field mustard	cytosol	65.43	69.1
CDY29418	Canola	cytosol	65.43	69.1
CDY39367	Canola	cytosol	65.16	68.63
VIT_06s0004g07610.t01	Wine grape	plastid	36.97	68.47
Os01t0105900-01	Rice	cytosol	66.76	66.23
VIT_18s0001g12750.t01	Wine grape	cytosol	67.55	65.8
KRH15175	Soybean	endoplasmic reticulum	70.21	65.35
TraesCS4B01G054400.1	Wheat	cytosol	64.36	65.23
TraesCS4D01G054500.1	Wheat	cytosol	64.1	64.96
TraesCS4A01G260200.2	Wheat	cytosol	64.36	64.88
Zm00001d040183_P001	Maize	plastid	64.63	64.8
KRH75060	Soybean	extracellular, mitochondrion	23.94	63.38
VIT_09s0070g00740.t01	Wine grape	cytosol	11.17	62.69
GSMUA_Achr2P22960_001	Banana	cytosol	11.97	60.0
Zm00001d008406_P002	Maize	plastid	64.63	58.13
VIT_00s0380g00030.t01	Wine grape	cytosol	13.03	57.65
KXG32133	Sorghum	cytosol	64.1	53.67
KRH38835	Soybean	peroxisome	38.83	52.33
GSMUA_Achr3P01160_001	Banana	cytosol	64.89	46.74
HORVU4Hr1G009140.1	Barley	plastid	56.38	42.66
Solyc03g097210.2.1	Tomato	plastid	23.67	18.35

Protein Annotations

EnsemblPlants:Solyc04g080580.2.1	EnsemblPlantsGene:Solyc04g080580.2	Gene3D:3.40.1190.20	InterPro:IPR029056	InterPro:PfkB_dom	InterPro:Ribokinase-like
PANTHER:PTHR43320	PANTHER:PTHR43320:SF1	PFAM:PF00294	SEG:seg	SUPFAM:SSF53613	UniParc:UPI0002765A77
UniProt:K4BVD7	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr4:+:64697407..64701248

Molecular Weight (calculated)

40613.9 Da

IEP (calculated)

4.756

GRAVY (calculated)

0.024

Length

376 amino acids

Sequence
(BLAST)

001: MGVEIRPATI NGENQSESVN IGAPVVLGLQ PFALVDHIAK VDWSLLSQIP GERGGSFPVA VEELKYILNE LNAHILPSTD NESILKTIAG GSVANTIRGL
101: AAGFGISSGI IGACGEDEEG KLFMSNMGFY KVDLSRLRLK NGTTAQCVCL VDEVGNRTMR PCLSGSVKVQ ADELKREDFK GSKWLVLRYA ILNVEVIKVA
201: IKIAKEEGLF VSLDLASFEM VRKFKSPLIE LLESGNIDLC FANEDEATEL LRGEEKADPD AALEYLAKYC KWAVVTLAQN GCIAKHEKEF VRVPAIGEAK
301: VTDATGAGDL FASGFLYGLV RGLSLEECCR VGSCSGGSVI RSLGGEVTPE NWQWMYKQMQ TNGLQLPEPS KSSVVT

Best Arabidopsis Sequence Match ( AT1G19600.1 )
(BLAST)

001: MVAEALPKCP EAPLVLGLQP AALIDNVAPV DWSLLDQIPG DRGGSIAVQK DELEHMLKEL DAHISVAPLK KMAGGSVTNT VRGLSVGFGV ATGIIGAYGD
101: DEQGQLFVSN MGFSGVSISR LRKKKGSTAQ CVCLVDDSGN RTMRPCLSSA VKIQADELSK EDFTGSKWLV LRYAVLNLQV IQAAIRFAKQ EGLSVSLDLA
201: SFEMVRNSKS ELRQLLESGN IDLCFANEDE AAELLRGEQE AGPEAALEFL GRHCRWAVVT LGSKGCIAKH DKEVVHISAI GETVATDATG AGDLFASGFL
301: YGLIKGLSLE ECCKVGSCSG GSVIRALGGE VTPENWQWMH KQLQLKGLPV PDIHN

Arabidopsis Description

At1g19600 [Source:UniProtKB/TrEMBL;Acc:Q9LN35]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.