CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15175	Soybean	endoplasmic reticulum	91.22	84.9
KRH61143	Soybean	cytosol	76.33	81.07
KRH75060	Soybean	extracellular, mitochondrion	27.66	73.24
AT1G19600.1	Thale cress	cytosol, peroxisome, plastid	67.82	71.83
VIT_06s0004g07610.t01	Wine grape	plastid	38.3	70.94
Bra025751.1-P	Field mustard	cytosol	67.02	70.79
CDY29418	Canola	cytosol	67.02	70.79
CDY39367	Canola	cytosol	66.76	70.31
Solyc04g080580.2.1	Tomato	cytosol	69.95	69.95
PGSC0003DMT400009476	Potato	cytosol	69.41	69.41
Os01t0105900-01	Rice	cytosol	66.76	66.23
TraesCS4D01G054500.1	Wheat	cytosol	64.1	64.96
TraesCS4B01G054400.1	Wheat	cytosol	64.1	64.96
TraesCS4A01G260200.2	Wheat	cytosol	64.36	64.88
Zm00001d040183_P001	Maize	plastid	64.36	64.53
GSMUA_Achr2P22960_001	Banana	cytosol	12.5	62.67
KRH38835	Soybean	peroxisome	46.28	62.37
VIT_00s0380g00030.t01	Wine grape	cytosol	14.1	62.35
Zm00001d008406_P002	Maize	plastid	64.63	58.13
KXG32133	Sorghum	cytosol	64.1	53.67
GSMUA_Achr3P01160_001	Banana	cytosol	63.83	45.98
HORVU4Hr1G009140.1	Barley	plastid	57.45	43.46
KRH29306	Soybean	plastid	23.14	19.51
KRH24012	Soybean	plastid	23.4	19.09

Protein Annotations

EMBL:ACUP02010781	EnsemblPlants:KRH05844	EnsemblPlantsGene:GLYMA_17G251900	EntrezGene:100795959	Gene3D:3.40.1190.20	InterPro:IPR029056
InterPro:PfkB_dom	InterPro:Ribokinase-like	PANTHER:PTHR43320	PANTHER:PTHR43320:SF1	PFAM:PF00294	ProteinID:KRH05844
ProteinID:KRH05844.1	SEG:seg	SUPFAM:SSF53613	UniParc:UPI000233E960	UniProt:I1MXX4	MapMan:35.2

Description

hypothetical protein

Coordinates

chr17:+:40640731..40644506

Molecular Weight (calculated)

40457.5 Da

IEP (calculated)

4.938

GRAVY (calculated)

-0.057

Length

376 amino acids

Sequence
(BLAST)

001: MGAEPLSKNE VALAQTQAPF VLGLQPSALV DHVARVDWSL LDQIPGEHGG SIPVELGELE HILREVKIHI VSCHDNDDDD YPSSHIKTLA GGSVANTIRG
101: LSNGFGISSG IIGACGDDEQ GKLFDHNMSS NGVDLSRLRK KKGHTAQCVC LVDDLGNRTM RPCLSNAVKV QAEELAKEDF KGSKWLVLRY AILNLEVIQA
201: AILLAKQEGL LVSLDLASFE MVRNFKQPLL KLLESGNIDL CFANEDEATE LLRGEQNADP ATAVEFLAKY CQWAVVTLGP NGCIAKHGNE IARVPAIGEA
301: KAIDATGAGD LFASGFLYGV IKGLSLEECC KVGACSGGSV VRSLGGQVTL ENRHWMYKQM QIKDLPTPDT IQITNE

Best Arabidopsis Sequence Match ( AT1G19600.1 )
(BLAST)

001: MVAEALPKCP EAPLVLGLQP AALIDNVAPV DWSLLDQIPG DRGGSIAVQK DELEHMLKEL DAHISVAPLK KMAGGSVTNT VRGLSVGFGV ATGIIGAYGD
101: DEQGQLFVSN MGFSGVSISR LRKKKGSTAQ CVCLVDDSGN RTMRPCLSSA VKIQADELSK EDFTGSKWLV LRYAVLNLQV IQAAIRFAKQ EGLSVSLDLA
201: SFEMVRNSKS ELRQLLESGN IDLCFANEDE AAELLRGEQE AGPEAALEFL GRHCRWAVVT LGSKGCIAKH DKEVVHISAI GETVATDATG AGDLFASGFL
301: YGLIKGLSLE ECCKVGSCSG GSVIRALGGE VTPENWQWMH KQLQLKGLPV PDIHN

Arabidopsis Description

At1g19600 [Source:UniProtKB/TrEMBL;Acc:Q9LN35]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.