CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, mitochondrion

Predictor Summary:

extracellular 4
golgi 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 2
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P22960_001	Banana	cytosol	18.31	34.67
VIT_06s0004g07610.t01	Wine grape	plastid	41.55	29.06
KRH61143	Soybean	cytosol	69.72	27.97
KRH05844	Soybean	cytosol	73.24	27.66
KRH38835	Soybean	peroxisome	51.41	26.16
KRH15175	Soybean	endoplasmic reticulum	73.24	25.74
AT1G19600.1	Thale cress	cytosol, peroxisome, plastid	61.27	24.51
PGSC0003DMT400009476	Potato	cytosol	64.08	24.2
Bra025751.1-P	Field mustard	cytosol	60.56	24.16
CDY29418	Canola	cytosol	60.56	24.16
CDY39367	Canola	cytosol	60.56	24.09
Solyc04g080580.2.1	Tomato	cytosol	63.38	23.94
Zm00001d040183_P001	Maize	plastid	58.45	22.13
TraesCS4A01G260200.2	Wheat	cytosol	57.75	21.98
TraesCS4B01G054400.1	Wheat	cytosol	57.04	21.83
TraesCS4D01G054500.1	Wheat	cytosol	57.04	21.83
Os01t0105900-01	Rice	cytosol	56.34	21.11
Zm00001d008406_P002	Maize	plastid	57.75	19.62
KXG32133	Sorghum	cytosol	57.75	18.26
HORVU4Hr1G009140.1	Barley	plastid	57.04	16.3
GSMUA_Achr3P01160_001	Banana	cytosol	53.52	14.56
KRH29306	Soybean	plastid	19.72	6.28
KRH24012	Soybean	plastid	19.72	6.07
VIT_00s0380g00030.t01	Wine grape	cytosol	3.52	5.88

Protein Annotations

EMBL:ACUP02000111	EnsemblPlants:KRH75060	EnsemblPlantsGene:GLYMA_01G059600	Gene3D:3.40.1190.20	InterPro:IPR029056	InterPro:Ribokinase-like
PANTHER:PTHR43320	PANTHER:PTHR43320:SF1	ProteinID:KRH75060	ProteinID:KRH75060.1	SEG:seg	SUPFAM:SSF53613
UniParc:UPI0006ED9A7B	UniProt:A0A0R0LFU8	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:7880023..7882351

Molecular Weight (calculated)

15595.4 Da

IEP (calculated)

8.768

GRAVY (calculated)

0.425

Length

142 amino acids

Sequence
(BLAST)

001: MRCYSVQLVR VGSVAIRFGL TWFFCTPLKT LAGGSVANII RGLSNGFGIS SGIIGGVWGM MSKCVCLVDD FGNHTMRPCL SNGVKVQEEE LTKEDFKGSK
101: WLVLRYAILN LEVIQAAILL AKQEGLLVSL DLASFEMVRN FK

Best Arabidopsis Sequence Match ( AT1G19600.1 )
(BLAST)

001: MVAEALPKCP EAPLVLGLQP AALIDNVAPV DWSLLDQIPG DRGGSIAVQK DELEHMLKEL DAHISVAPLK KMAGGSVTNT VRGLSVGFGV ATGIIGAYGD
101: DEQGQLFVSN MGFSGVSISR LRKKKGSTAQ CVCLVDDSGN RTMRPCLSSA VKIQADELSK EDFTGSKWLV LRYAVLNLQV IQAAIRFAKQ EGLSVSLDLA
201: SFEMVRNSKS ELRQLLESGN IDLCFANEDE AAELLRGEQE AGPEAALEFL GRHCRWAVVT LGSKGCIAKH DKEVVHISAI GETVATDATG AGDLFASGFL
301: YGLIKGLSLE ECCKVGSCSG GSVIRALGGE VTPENWQWMH KQLQLKGLPV PDIHN

Arabidopsis Description

At1g19600 [Source:UniProtKB/TrEMBL;Acc:Q9LN35]
SUBAcon: [cytosol,peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.