Factsheet for Zm00001d040183_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G054400.1	Wheat	cytosol	84.27	85.18
TraesCS4D01G054500.1	Wheat	cytosol	84.0	84.91
TraesCS4A01G260200.2	Wheat	cytosol	83.47	83.91
Os01t0105900-01	Rice	cytosol	82.93	82.06
Zm00001d008406_P002	Maize	plastid	90.93	81.58
KXG32133	Sorghum	cytosol	92.27	77.06
AT1G19600.1	Thale cress	cytosol, peroxisome, plastid	66.13	69.86
Bra025751.1-P	Field mustard	cytosol	66.13	69.66
CDY29418	Canola	cytosol	66.13	69.66
CDY39367	Canola	cytosol	66.13	69.47
KRH61143	Soybean	cytosol	64.0	67.8
GSMUA_Achr2P22960_001	Banana	cytosol	13.07	65.33
PGSC0003DMT400009476	Potato	cytosol	64.8	64.63
Solyc04g080580.2.1	Tomato	cytosol	64.8	64.63
KRH05844	Soybean	cytosol	64.53	64.36
VIT_09s0070g00740.t01	Wine grape	cytosol	11.2	62.69
VIT_18s0001g12750.t01	Wine grape	cytosol	64.27	62.44
VIT_06s0004g07610.t01	Wine grape	plastid	33.33	61.58
KRH15175	Soybean	endoplasmic reticulum	63.73	59.16
KRH75060	Soybean	extracellular, mitochondrion	22.13	58.45
HORVU4Hr1G009140.1	Barley	plastid	73.07	55.13
GSMUA_Achr3P01160_001	Banana	cytosol	69.87	50.19
VIT_00s0380g00030.t01	Wine grape	cytosol	10.93	48.24
KRH38835	Soybean	peroxisome	34.13	45.88
Zm00001d047033_P001	Maize	plastid	8.53	22.54
Zm00001d030048_P001	Maize	plastid	20.53	16.81
Zm00001d047032_P001	Maize	mitochondrion, plastid	7.73	16.67

Protein Annotations

Gene3D:3.40.1190.20	MapMan:35.2	UniProt:B4FRB2	EMBL:BT039650	InterPro:Carboh/pur_kinase_PfkB_CS	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0016773	InterPro:IPR029056	ProteinID:ONM30734.1	PFAM:PF00294	ScanProsite:PS00584
PANTHER:PTHR43320	PANTHER:PTHR43320:SF1	InterPro:PfkB_dom	InterPro:Ribokinase-like	SUPFAM:SSF53613	UniParc:UPI00017B7F67
EnsemblPlantsGene:Zm00001d040183	EnsemblPlants:Zm00001d040183_P001	EnsemblPlants:Zm00001d040183_T001	:	:	:

Description

pfkB-like carbohydrate kinase family protein

Coordinates

chr3:+:30975610..30980210

Molecular Weight (calculated)

40120.1 Da

IEP (calculated)

6.506

GRAVY (calculated)

-0.109

Length

375 amino acids

Sequence
(BLAST)

001: MGAEAAHGHP QQQPPSSLRP GREAAAPPAV VGLQLSALID HVARVDWSLL DRVPGDRGGS QQVSIDELNH ILDEVNAHIL PSRNDLTPVT TIAGGSVANT
101: IRGLSAGFGI STGIIGACGD DNQGLLFVNN MSFSGVDLTR LRAKKGHTAQ CVCLVDASGN RTMRPCLSSA VKIQANEFRK EDFKGSKWLI VRYAQQNMEQ
201: IVEAIRIAKQ EGLSVSLDLA SFEMVRDSRS KLVNLLETGN IDLCFANEDE AREVIGGSLE SDPEEALAFL GKYCKWAVVT LASKGCMAKH GKQVVRVPAI
301: GESNAVDTTG AGDLFASGFL YGLVKGLPLE ECCKVGACSG GSVTRALGGE VRPENWQWMY KQMHARGLLL PELKN

Best Arabidopsis Sequence Match ( AT1G19600.1 )
(BLAST)

001: MVAEALPKCP EAPLVLGLQP AALIDNVAPV DWSLLDQIPG DRGGSIAVQK DELEHMLKEL DAHISVAPLK KMAGGSVTNT VRGLSVGFGV ATGIIGAYGD
101: DEQGQLFVSN MGFSGVSISR LRKKKGSTAQ CVCLVDDSGN RTMRPCLSSA VKIQADELSK EDFTGSKWLV LRYAVLNLQV IQAAIRFAKQ EGLSVSLDLA
201: SFEMVRNSKS ELRQLLESGN IDLCFANEDE AAELLRGEQE AGPEAALEFL GRHCRWAVVT LGSKGCIAKH DKEVVHISAI GETVATDATG AGDLFASGFL
301: YGLIKGLSLE ECCKVGSCSG GSVIRALGGE VTPENWQWMH KQLQLKGLPV PDIHN

Arabidopsis Description

At1g19600 [Source:UniProtKB/TrEMBL;Acc:Q9LN35]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.