Factsheet for Zm00001d047032_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

mitochondrion 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d044874_P001
Zm00001d052194_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G27600.1	Zm00001d044874_P001	AT4G25200.1	21798944
AT4G27600.1	Zm00001d052194_P001	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0039g01580.t01	Wine grape	cytosol	60.92	28.96
Zm00001d030048_P001	Maize	plastid	74.14	28.17
CDY56323	Canola	cytosol	58.62	26.84
GSMUA_Achr11P...	Banana	plastid	63.22	23.21
KRH29306	Soybean	plastid	59.2	23.09
CDY29847	Canola	plastid	59.2	22.59
Bra019040.1-P	Field mustard	plastid	59.2	22.54
Bra026335.1-P	Field mustard	plastid	59.2	22.39
CDX89233	Canola	plastid	59.2	22.39
AT4G27600.1	Thale cress	plastid	60.34	22.29
KRH24012	Soybean	plastid	58.62	22.13
Solyc03g097210.2.1	Tomato	plastid	56.32	20.21
PGSC0003DMT400068057	Potato	plastid	56.9	20.0
Zm00001d040183_P001	Maize	plastid	16.67	7.73
Zm00001d008406_P002	Maize	plastid	16.67	6.94
Zm00001d047033_P001	Maize	plastid	3.45	4.23

Protein Annotations

EnsemblPlants:Zm00001d047032_P001	EnsemblPlants:Zm00001d047032_T001	EnsemblPlantsGene:Zm00001d047032	Gene3D:3.40.1190.20	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
InterPro:IPR029056	InterPro:PfkB_dom	InterPro:Ribokinase-like	PANTHER:PTHR43085	PANTHER:PTHR43085:SF1	PFAM:PF00294
ProteinID:AQL05451.1	SUPFAM:SSF53613	UniParc:UPI000221E6B6	UniProt:K7VK13	MapMan:35.2	:

Description

pfkB-like carbohydrate kinase family protein

Coordinates

chr9:+:116119750..116149581

Molecular Weight (calculated)

18594.1 Da

IEP (calculated)

7.810

GRAVY (calculated)

-0.058

Length

174 amino acids

Sequence
(BLAST)

001: MRRGDGSCVP WMGAATRLQL VAPCPTRSWR WQGLALGSSQ SAGCPELKIA LAGSVGSDPL GSFYRAKLRR ANVHFLSKPV KDGATGTVIV LTTPDAQRSM
101: LAYQGTSSTL SYDSDLASSV SKSNVVIVEG YLFELPHTIE AIKQACEDAH QNGALVAVTA SDVSCIEHCY NDFR

Best Arabidopsis Sequence Match ( AT4G27600.1 )
(BLAST)

001: MAFSLLSPIP TSASLFFTLS AITASNNASS SSLSRLYSLY HPKGTLRTRT ATSFFGASGN LRIVSMAENR QLVCRIGGGA GAELDDMDEG EIQRIGNEDE
101: DDDEFIQVHA NNSSAASPER WDVLGLGQAM VDFSGVVDDE FLKKLGLEKG TRKLINHEER GKLLQAMDGC SYKAAAGGSL SNTLVALARL GSQSICDRPL
201: NVAMAGSIGG DPLGSFYGTK LRRANVNFLS APIKDGTTGT VIVLTTPDAQ RTMLAYQGTS SVVNYDSCLA SLIAKTNVFV VEGYLFELPD TIRTITKACE
301: EAHRNGALVA VTASDVSCIE RHYDDFWDIV GNYADIVFAN SDEARAFCHF SAEESPISAT RYMSHFVPFV SVTDGINGSY IGVKGEAIYI PPSPCVPVDT
401: CGAGDAYASG ILYGILRGVS DLKGMGDMAA TIAATVVGQQ GTRLRVQDAV ELARSHAFRL NGSGVRTDVG S

Arabidopsis Description

NARA5AT4g27600/T29A15_90 [Source:UniProtKB/TrEMBL;Acc:Q940Y6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.