CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX68863
CDX75256
CDX83601
CDX89437
CDY03368
CDY23332
CDY30950
CDY51673

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G27600.1	CDX89437	AT4G25200.1	21798944
AT4G27600.1	CDY03368	AT4G25200.1	21798944
AT4G27600.1	CDX68863	AT4G32570.1	21798944
AT4G27600.1	CDX75256	AT4G32570.1	21798944
AT4G27600.1	CDX83601	AT4G32570.1	21798944
AT4G27600.1	CDY23332	AT4G32570.1	21798944
AT4G27600.1	CDY30950	AT4G32570.1	21798944
AT4G27600.1	CDY51673	AT4G32570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56323	Canola	cytosol	82.24	98.68
Bra019040.1-P	Field mustard	plastid	96.71	96.5
VIT_16s0039g01580.t01	Wine grape	cytosol	64.69	80.6
CDX89233	Canola	plastid	76.32	75.65
AT4G27600.1	Thale cress	plastid	77.41	74.95
KRH24012	Soybean	plastid	63.82	63.12
KRH29306	Soybean	plastid	61.4	62.78
GSMUA_Achr11P...	Banana	plastid	64.04	61.6
Zm00001d047033_P001	Maize	plastid	18.86	60.56
EER94451	Sorghum	plastid	60.53	59.23
Zm00001d047032_P001	Maize	mitochondrion, plastid	22.59	59.2
PGSC0003DMT400068057	Potato	plastid	64.04	58.99
TraesCS1A01G191300.1	Wheat	mitochondrion	59.65	58.87
TraesCS1B01G206200.1	Wheat	mitochondrion, plastid	59.65	58.87
TraesCS1D01G195000.1	Wheat	mitochondrion, plastid	59.43	58.66
Zm00001d030048_P001	Maize	plastid	58.77	58.52
Os10t0573000-01	Rice	mitochondrion	58.33	58.08
Solyc03g097210.2.1	Tomato	plastid	61.4	57.73
HORVU0Hr1G000280.1	Barley	plastid	58.99	52.85
CDY29418	Canola	cytosol	16.89	21.63
CDY39367	Canola	cytosol	16.45	21.01

Protein Annotations

EnsemblPlants:CDY29847	EnsemblPlantsGene:GSBRNA2T00044283001	Gene3D:3.40.1190.20	GO:A0A078GXC9	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016773	InterPro:Carboh/pur_kinase_PfkB_CS	InterPro:IPR029056	InterPro:PfkB_dom	InterPro:Ribokinase-like
PANTHER:PTHR43085	PANTHER:PTHR43085:SF1	PFAM:PF00294	ProteinID:CDY29847	ProteinID:CDY29847.1	ScanProsite:PS00584
SEG:seg	SUPFAM:SSF53613	UniParc:UPI0004EF2601	UniProt:A0A078GXC9	MapMan:35.2	:

Description

BnaA03g48680DBnaA03g48680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GXC9]

Coordinates

chrLK032245:-:49648..51794

Molecular Weight (calculated)

48660.2 Da

IEP (calculated)

4.639

GRAVY (calculated)

-0.082

Length

456 amino acids

Sequence
(BLAST)

001: MAALSLLSPI PSSASLPPIY SLYHFKTLQS NKTSSTSISG GFRSSWNLRI DSKAGKRQLG LMVSRNGGGG ELDDMDEGQI ENIGDQDEDD EEWTQAHASS
101: SSSSPERWDV LGLGQAMVDF SGVVDDAFLE KLDLEKGTRK LINHEERGRV LQAMDGCSYK AAAGGSLSNT LVALARLGCP SITDRPLNVA MAGSIAGDPL
201: GSFYRTKLRR ANVNFLSAPI MDGTTGTVIV LTTPDAQRTM LAYQGTSSVV NYDSCLASLI SKTNVFVVEG YLFELPDTIR TITKACEEAH RNGALVAVTA
301: SDVSCIERHY DDFWDIVGNY ADIIFANSDE ARAFCHFSAE ESPISATRYL SHFVPFVSVT DGINGSYIGA KGEAIYIPPS PCVPVDTCGA GDAYASGILY
401: GILRGVTDLK GMGELAATIA ATVVGQQGTR LRVQDAVELA RSHDFRLNSV GTDVGS

Best Arabidopsis Sequence Match ( AT4G27600.1 )
(BLAST)

001: MAFSLLSPIP TSASLFFTLS AITASNNASS SSLSRLYSLY HPKGTLRTRT ATSFFGASGN LRIVSMAENR QLVCRIGGGA GAELDDMDEG EIQRIGNEDE
101: DDDEFIQVHA NNSSAASPER WDVLGLGQAM VDFSGVVDDE FLKKLGLEKG TRKLINHEER GKLLQAMDGC SYKAAAGGSL SNTLVALARL GSQSICDRPL
201: NVAMAGSIGG DPLGSFYGTK LRRANVNFLS APIKDGTTGT VIVLTTPDAQ RTMLAYQGTS SVVNYDSCLA SLIAKTNVFV VEGYLFELPD TIRTITKACE
301: EAHRNGALVA VTASDVSCIE RHYDDFWDIV GNYADIVFAN SDEARAFCHF SAEESPISAT RYMSHFVPFV SVTDGINGSY IGVKGEAIYI PPSPCVPVDT
401: CGAGDAYASG ILYGILRGVS DLKGMGDMAA TIAATVVGQQ GTRLRVQDAV ELARSHAFRL NGSGVRTDVG S

Arabidopsis Description

NARA5AT4g27600/T29A15_90 [Source:UniProtKB/TrEMBL;Acc:Q940Y6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.