Factsheet for Zm00001d047033_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d044874_P001
Zm00001d052194_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G27600.1	Zm00001d044874_P001	AT4G25200.1	21798944
AT4G27600.1	Zm00001d052194_P001	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94451	Sorghum	plastid	85.92	26.18
Zm00001d030048_P001	Maize	plastid	81.69	25.33
VIT_16s0039g01580.t01	Wine grape	cytosol	62.68	24.32
Os10t0573000-01	Rice	mitochondrion	78.17	24.24
TraesCS1D01G195000.1	Wheat	mitochondrion, plastid	76.76	23.59
TraesCS1A01G191300.1	Wheat	mitochondrion	76.06	23.38
TraesCS1B01G206200.1	Wheat	mitochondrion, plastid	76.06	23.38
CDY56323	Canola	cytosol	61.27	22.89
GSMUA_Achr11P...	Banana	plastid	71.13	21.31
HORVU0Hr1G000280.1	Barley	plastid	76.06	21.22
KRH29306	Soybean	plastid	60.56	19.28
PGSC0003DMT400068057	Potato	plastid	66.2	18.99
Solyc03g097210.2.1	Tomato	plastid	64.79	18.97
CDX89233	Canola	plastid	61.27	18.91
CDY29847	Canola	plastid	60.56	18.86
Bra019040.1-P	Field mustard	plastid	60.56	18.82
Bra026335.1-P	Field mustard	plastid	60.56	18.7
KRH24012	Soybean	plastid	60.56	18.66
AT4G27600.1	Thale cress	plastid	61.27	18.47
Zm00001d040183_P001	Maize	plastid	22.54	8.53
Zm00001d008406_P002	Maize	plastid	21.83	7.42
Zm00001d047032_P001	Maize	mitochondrion, plastid	4.23	3.45

Protein Annotations

Gene3D:3.40.1190.20	MapMan:35.2	ProteinID:AQL05452.1	InterPro:Carboh/pur_kinase_PfkB_CS	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0016773	InterPro:IPR029056	UniProt:K7VC50	PFAM:PF00294	ScanProsite:PS00584	PANTHER:PTHR43085
PANTHER:PTHR43085:SF1	InterPro:PfkB_dom	InterPro:Ribokinase-like	SUPFAM:SSF53613	UniParc:UPI000221DD7D	EnsemblPlantsGene:Zm00001d047033
EnsemblPlants:Zm00001d047033_P001	EnsemblPlants:Zm00001d047033_T001	:	:	:	:

Description

pfkB-like carbohydrate kinase family protein

Coordinates

chr9:+:116160974..116161402

Molecular Weight (calculated)

14959.9 Da

IEP (calculated)

5.036

GRAVY (calculated)

0.182

Length

142 amino acids

Sequence
(BLAST)

001: MQIYCLPTPV KQGPTAYCEL PSTDSPMSAT RCLSHSVPLV SVTDGMHGSY IGVKGEAIYV PPPPCIPVDT CGAGDAYASG ILYGILRGAS DLKGIGLLAS
101: RVAAVVVGQQ GTHLRVQDAD RLAESFAHHL DSLEFCSDVW IE

Best Arabidopsis Sequence Match ( AT4G27600.1 )
(BLAST)

001: MAFSLLSPIP TSASLFFTLS AITASNNASS SSLSRLYSLY HPKGTLRTRT ATSFFGASGN LRIVSMAENR QLVCRIGGGA GAELDDMDEG EIQRIGNEDE
101: DDDEFIQVHA NNSSAASPER WDVLGLGQAM VDFSGVVDDE FLKKLGLEKG TRKLINHEER GKLLQAMDGC SYKAAAGGSL SNTLVALARL GSQSICDRPL
201: NVAMAGSIGG DPLGSFYGTK LRRANVNFLS APIKDGTTGT VIVLTTPDAQ RTMLAYQGTS SVVNYDSCLA SLIAKTNVFV VEGYLFELPD TIRTITKACE
301: EAHRNGALVA VTASDVSCIE RHYDDFWDIV GNYADIVFAN SDEARAFCHF SAEESPISAT RYMSHFVPFV SVTDGINGSY IGVKGEAIYI PPSPCVPVDT
401: CGAGDAYASG ILYGILRGVS DLKGMGDMAA TIAATVVGQQ GTRLRVQDAV ELARSHAFRL NGSGVRTDVG S

Arabidopsis Description

NARA5AT4g27600/T29A15_90 [Source:UniProtKB/TrEMBL;Acc:Q940Y6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.