CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX68863
CDX75256
CDX83601
CDX89437
CDY03368
CDY23332
CDY30950
CDY51673

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G27600.1	CDX89437	AT4G25200.1	21798944
AT4G27600.1	CDY03368	AT4G25200.1	21798944
AT4G27600.1	CDX68863	AT4G32570.1	21798944
AT4G27600.1	CDX75256	AT4G32570.1	21798944
AT4G27600.1	CDX83601	AT4G32570.1	21798944
AT4G27600.1	CDY23332	AT4G32570.1	21798944
AT4G27600.1	CDY30950	AT4G32570.1	21798944
AT4G27600.1	CDY51673	AT4G32570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29847	Canola	plastid	98.68	82.24
Bra019040.1-P	Field mustard	plastid	97.37	80.96
VIT_16s0039g01580.t01	Wine grape	cytosol	77.11	80.05
CDX89233	Canola	plastid	89.74	74.13
AT4G27600.1	Thale cress	plastid	89.74	72.4
Zm00001d047033_P001	Maize	plastid	22.89	61.27
KRH29306	Soybean	plastid	71.84	61.21
KRH24012	Soybean	plastid	73.16	60.3
Zm00001d047032_P001	Maize	mitochondrion, plastid	26.84	58.62
GSMUA_Achr11P...	Banana	plastid	72.63	58.23
EER94451	Sorghum	plastid	70.53	57.51
Zm00001d030048_P001	Maize	plastid	68.95	57.21
Os10t0573000-01	Rice	mitochondrion	68.68	56.99
PGSC0003DMT400068057	Potato	plastid	73.42	56.36
Solyc03g097210.2.1	Tomato	plastid	71.84	56.29
TraesCS1A01G191300.1	Wheat	mitochondrion	68.16	56.06
TraesCS1B01G206200.1	Wheat	mitochondrion, plastid	68.16	56.06
TraesCS1D01G195000.1	Wheat	mitochondrion, plastid	67.89	55.84
HORVU0Hr1G000280.1	Barley	plastid	68.16	50.88
CDY29418	Canola	cytosol	19.47	20.79
CDY39367	Canola	cytosol	18.95	20.17

Protein Annotations

Gene3D:3.40.1190.20	MapMan:35.2	GO:A0A078J0C8	UniProt:A0A078J0C8	EnsemblPlants:CDY56323	ProteinID:CDY56323
ProteinID:CDY56323.1	InterPro:Carboh/pur_kinase_PfkB_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016773	EnsemblPlantsGene:GSBRNA2T00019434001
InterPro:IPR029056	PFAM:PF00294	PRINTS:PR00990	ScanProsite:PS00584	PANTHER:PTHR43085	PANTHER:PTHR43085:SF1
InterPro:PfkB_dom	InterPro:Ribo/fructo_kinase	InterPro:Ribokinase-like	SUPFAM:SSF53613	UniParc:UPI0004EE8F4A	:

Description

BnaC07g50370DBnaC07g50370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0C8]

Coordinates

chrLK033478:-:24359..26215

Molecular Weight (calculated)

40634.8 Da

IEP (calculated)

4.399

GRAVY (calculated)

-0.028

Length

380 amino acids

Sequence
(BLAST)

001: MDEGQIENIC GQDEDDEEWT QAHASSSSPE RWDVLGLGQA MVDFSGVVDD AFLEKLDLEK GTRKLINHEE RGRVLQAMDG CSYKAAAGGS LSNTLVALAR
101: LGCPSITDRP LNVAMAGSIA GDPLGSFYRT KLRRANINFL SAPIMDGTTG TVIVLTTPDA QRTMLAYQGT SSVVNYDSCL ASLISKTNVF VVEGYLFELP
201: DTIRTITKAC EEAHRNGALV AVTASDVSCI ERHYDDFWDI VGNYADIIFA NSDEARAFCH FSADESPISA TRYLSHFVPF VSVTDGINGS YIGAKGEAIY
301: IPPSPCVPVD TCGAGDAYAS GILYGILRGV TDLKGMGELA ATIAATVVGQ QGTRLRVQDA VELARSHDFR LNSVGTDVGS

Best Arabidopsis Sequence Match ( AT4G27600.1 )
(BLAST)

001: MAFSLLSPIP TSASLFFTLS AITASNNASS SSLSRLYSLY HPKGTLRTRT ATSFFGASGN LRIVSMAENR QLVCRIGGGA GAELDDMDEG EIQRIGNEDE
101: DDDEFIQVHA NNSSAASPER WDVLGLGQAM VDFSGVVDDE FLKKLGLEKG TRKLINHEER GKLLQAMDGC SYKAAAGGSL SNTLVALARL GSQSICDRPL
201: NVAMAGSIGG DPLGSFYGTK LRRANVNFLS APIKDGTTGT VIVLTTPDAQ RTMLAYQGTS SVVNYDSCLA SLIAKTNVFV VEGYLFELPD TIRTITKACE
301: EAHRNGALVA VTASDVSCIE RHYDDFWDIV GNYADIVFAN SDEARAFCHF SAEESPISAT RYMSHFVPFV SVTDGINGSY IGVKGEAIYI PPSPCVPVDT
401: CGAGDAYASG ILYGILRGVS DLKGMGDMAA TIAATVVGQQ GTRLRVQDAV ELARSHAFRL NGSGVRTDVG S

Arabidopsis Description

NARA5AT4g27600/T29A15_90 [Source:UniProtKB/TrEMBL;Acc:Q940Y6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.