CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER89430
EER89431
KXG19616
OQU75612
OQU75930
OQU76071
OQU85385

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G27600.1	EER89430	AT4G25200.1	21798944
AT4G27600.1	EER89431	AT4G25200.1	21798944
AT4G27600.1	KXG19616	AT4G25200.1	21798944
AT4G27600.1	OQU75612	AT4G25200.1	21798944
AT4G27600.1	OQU75930	AT4G25200.1	21798944
AT4G27600.1	OQU76071	AT4G25200.1	21798944
AT4G27600.1	OQU85385	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047033_P001	Maize	plastid	26.18	85.92
Zm00001d030048_P001	Maize	plastid	82.19	83.62
Os10t0573000-01	Rice	mitochondrion	74.89	76.2
VIT_16s0039g01580.t01	Wine grape	cytosol	58.15	74.04
TraesCS1D01G195000.1	Wheat	mitochondrion, plastid	73.39	74.03
TraesCS1B01G206200.1	Wheat	mitochondrion, plastid	72.96	73.59
TraesCS1A01G191300.1	Wheat	mitochondrion	72.96	73.59
CDY56323	Canola	cytosol	57.51	70.53
HORVU0Hr1G000280.1	Barley	plastid	72.75	66.6
GSMUA_Achr11P...	Banana	plastid	66.09	64.98
CDY29847	Canola	plastid	59.23	60.53
Bra026335.1-P	Field mustard	plastid	59.44	60.22
CDX89233	Canola	plastid	59.44	60.22
Bra019040.1-P	Field mustard	plastid	59.01	60.18
KRH29306	Soybean	plastid	57.3	59.87
AT4G27600.1	Thale cress	plastid	60.3	59.66
KRH24012	Soybean	plastid	57.51	58.13
Solyc03g097210.2.1	Tomato	plastid	60.09	57.73
PGSC0003DMT400068057	Potato	plastid	59.23	55.76
KXG32133	Sorghum	cytosol	18.24	18.93

Protein Annotations

Gene3D:3.40.1190.20	MapMan:35.2	EntrezGene:8055153	UniProt:C5WRC5	InterPro:Carboh/pur_kinase_PfkB_CS	EnsemblPlants:EER94451
ProteinID:EER94451	ProteinID:EER94451.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0015979	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016773
InterPro:IPR029056	PFAM:PF00294	PRINTS:PR00990	ScanProsite:PS00584	PANTHER:PTHR43085	PANTHER:PTHR43085:SF1
InterPro:PfkB_dom	InterPro:Ribo/fructo_kinase	InterPro:Ribokinase-like	EnsemblPlantsGene:SORBI_3001G289500	SUPFAM:SSF53613	unigene:Sbi.8781
UniParc:UPI0001A82EB1	RefSeq:XP_002467453.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:56573292..56576762

Molecular Weight (calculated)

49504.6 Da

IEP (calculated)

6.024

GRAVY (calculated)

-0.096

Length

466 amino acids

Sequence
(BLAST)

001: MALTSATTAA ATVSSPSRII RRFASSPDSR APSSLLRLAP RRGAENSPRA CSWHRLVVVR RMDGRARALL GGLSDAGGSE SDEEEEEEEH ALRGGQREGE
101: VDDAVALSAA AVGPERWDVL GLGQAMVDFS GMVDDEFLQR LSIEKGTRKV INHEERGRVL RAMDGCSYKA AAGGSLSNSL VALARLGSSQ SAGYPELKIA
201: MAGSVGSDPL GSFYRAKLRR ANVHFLSKPV KDGTTGTVIV LTTPDAQRTM LAYQGTSSTL SYDSDLASLV SKSNVLIVEG YLFELPHTIE AIRQACEDAH
301: KNGALIAVTA SDVSCIKRCY NDFRDIVGNY ADILFANANE ARAFCELPST ESPMSATRYL SHSVPLVSVT DGMHGSYIGV KGEAIYIPPP SCIPVDTCGA
401: GDAYASGILY GILRGASDLK GIGLLASRVA AVVVGQQGTR LRVQDADRLA ESFAHHLDSL EFCSDV

Best Arabidopsis Sequence Match ( AT4G27600.1 )
(BLAST)

001: MAFSLLSPIP TSASLFFTLS AITASNNASS SSLSRLYSLY HPKGTLRTRT ATSFFGASGN LRIVSMAENR QLVCRIGGGA GAELDDMDEG EIQRIGNEDE
101: DDDEFIQVHA NNSSAASPER WDVLGLGQAM VDFSGVVDDE FLKKLGLEKG TRKLINHEER GKLLQAMDGC SYKAAAGGSL SNTLVALARL GSQSICDRPL
201: NVAMAGSIGG DPLGSFYGTK LRRANVNFLS APIKDGTTGT VIVLTTPDAQ RTMLAYQGTS SVVNYDSCLA SLIAKTNVFV VEGYLFELPD TIRTITKACE
301: EAHRNGALVA VTASDVSCIE RHYDDFWDIV GNYADIVFAN SDEARAFCHF SAEESPISAT RYMSHFVPFV SVTDGINGSY IGVKGEAIYI PPSPCVPVDT
401: CGAGDAYASG ILYGILRGVS DLKGMGDMAA TIAATVVGQQ GTRLRVQDAV ELARSHAFRL NGSGVRTDVG S

Arabidopsis Description

NARA5AT4g27600/T29A15_90 [Source:UniProtKB/TrEMBL;Acc:Q940Y6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.