CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040183_P001	Maize	plastid	77.06	92.27
TraesCS4B01G054400.1	Wheat	cytosol	69.27	83.83
TraesCS4D01G054500.1	Wheat	cytosol	68.82	83.29
TraesCS4A01G260200.2	Wheat	cytosol	68.82	82.84
Os01t0105900-01	Rice	cytosol	69.49	82.32
Zm00001d008406_P002	Maize	plastid	76.39	82.06
Bra025751.1-P	Field mustard	cytosol	54.57	68.82
CDY29418	Canola	cytosol	54.57	68.82
AT1G19600.1	Thale cress	cytosol, peroxisome, plastid	54.34	68.73
CDY39367	Canola	cytosol	54.34	68.35
KRH61143	Soybean	cytosol	53.45	67.8
GSMUA_Achr2P22960_001	Banana	cytosol	10.91	65.33
PGSC0003DMT400009476	Potato	cytosol	53.67	64.1
Solyc04g080580.2.1	Tomato	cytosol	53.67	64.1
KRH05844	Soybean	cytosol	53.67	64.1
VIT_09s0070g00740.t01	Wine grape	cytosol	9.35	62.69
VIT_18s0001g12750.t01	Wine grape	cytosol	53.67	62.44
VIT_06s0004g07610.t01	Wine grape	plastid	27.62	61.08
KRH15175	Soybean	endoplasmic reticulum	53.23	59.16
KRH75060	Soybean	extracellular, mitochondrion	18.26	57.75
HORVU4Hr1G009140.1	Barley	plastid	62.14	56.14
GSMUA_Achr3P01160_001	Banana	cytosol	57.91	49.81
VIT_00s0380g00030.t01	Wine grape	cytosol	9.13	48.24
KRH38835	Soybean	peroxisome	28.29	45.52
EER94451	Sorghum	plastid	18.93	18.24

Protein Annotations

EnsemblPlants:KXG32133	EnsemblPlantsGene:SORBI_3003G105000	Gene3D:3.40.1190.20	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016773	InterPro:Carboh/pur_kinase_PfkB_CS	InterPro:IPR029056	InterPro:PfkB_dom	InterPro:Ribokinase-like	ncoils:Coil
PANTHER:PTHR43320	PANTHER:PTHR43320:SF1	PFAM:PF00294	ProteinID:KXG32133	ProteinID:KXG32133.1	ScanProsite:PS00584
SEG:seg	SUPFAM:SSF53613	UniParc:UPI00081ACA38	UniProt:A0A1B6Q2J3	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr3:+:9486491..9491334

Molecular Weight (calculated)

48285.8 Da

IEP (calculated)

6.592

GRAVY (calculated)

-0.232

Length

449 amino acids

Sequence
(BLAST)

001: MMHRDPCKGS DEECPRSLCV RPVSPPPIKR ERRRPSPRRL AIPSAPDRAS FHTAGDLFPP PLEEWAGPTE GDHMGAEAGH TQQQPPSSLR PGREAAAAAA
101: PPAVLGLQLS ALIDHVARVD WSLLDRVSGD RGGSQQVSIE ELNHILDEVN AHILPSRNDL TPITTIAGGS VANTIRGLSA GFGISTGIIG ACGDDNQGLL
201: FVNNMSFSGV DLTRLRAKKG HTAQCVCLVD ASGNRTMRPC LSSAVKIQAN EFRKEDFKGS KWLIVRYAQQ NMEQIIEAIR IAKQEGLSVS LDLASFEMVR
301: DSRSKLINLL ETGNIDLCFA NEDEAREVIG GGLESDPEEA LAFLGKYCKW AVVTLASKGC MAKHGKQVVQ VPAIGESNAV DTTGAGDLFA SGFLYGLVKG
401: LPLEECCKVG ACSGGSVTRA LGGEVRPENW QWMYKQMNAR GLLLPELKN

Best Arabidopsis Sequence Match ( AT1G19600.1 )
(BLAST)

001: MVAEALPKCP EAPLVLGLQP AALIDNVAPV DWSLLDQIPG DRGGSIAVQK DELEHMLKEL DAHISVAPLK KMAGGSVTNT VRGLSVGFGV ATGIIGAYGD
101: DEQGQLFVSN MGFSGVSISR LRKKKGSTAQ CVCLVDDSGN RTMRPCLSSA VKIQADELSK EDFTGSKWLV LRYAVLNLQV IQAAIRFAKQ EGLSVSLDLA
201: SFEMVRNSKS ELRQLLESGN IDLCFANEDE AAELLRGEQE AGPEAALEFL GRHCRWAVVT LGSKGCIAKH DKEVVHISAI GETVATDATG AGDLFASGFL
301: YGLIKGLSLE ECCKVGSCSG GSVIRALGGE VTPENWQWMH KQLQLKGLPV PDIHN

Arabidopsis Description

At1g19600 [Source:UniProtKB/TrEMBL;Acc:Q9LN35]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.