Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d044874_P001 | |
| Zm00001d052194_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G27600.1 | Zm00001d044874_P001 | AT4G25200.1 | 21798944 |
| AT4G27600.1 | Zm00001d052194_P001 | AT4G25200.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER94451 | Sorghum | plastid | 83.62 | 82.19 |
| Zm00001d047033_P001 | Maize | plastid | 25.33 | 81.69 |
| Zm00001d047032_P001 | Maize | mitochondrion, plastid | 28.17 | 74.14 |
| Os10t0573000-01 | Rice | mitochondrion | 73.58 | 73.58 |
| VIT_16s0039g01580.t01 | Wine grape | cytosol | 58.3 | 72.95 |
| TraesCS1D01G195000.1 | Wheat | mitochondrion, plastid | 71.62 | 71.0 |
| TraesCS1A01G191300.1 | Wheat | mitochondrion | 71.18 | 70.56 |
| TraesCS1B01G206200.1 | Wheat | mitochondrion, plastid | 71.18 | 70.56 |
| CDY56323 | Canola | cytosol | 57.21 | 68.95 |
| HORVU0Hr1G000280.1 | Barley | plastid | 71.4 | 64.24 |
| GSMUA_Achr11P... | Banana | plastid | 64.19 | 62.03 |
| KRH29306 | Soybean | plastid | 58.3 | 59.87 |
| CDX89233 | Canola | plastid | 59.61 | 59.35 |
| Bra026335.1-P | Field mustard | plastid | 59.61 | 59.35 |
| CDY29847 | Canola | plastid | 58.52 | 58.77 |
| AT4G27600.1 | Thale cress | plastid | 60.26 | 58.6 |
| KRH24012 | Soybean | plastid | 58.95 | 58.57 |
| Bra019040.1-P | Field mustard | plastid | 58.3 | 58.42 |
| Solyc03g097210.2.1 | Tomato | plastid | 59.83 | 56.49 |
| PGSC0003DMT400068057 | Potato | plastid | 58.95 | 54.55 |
| Zm00001d040183_P001 | Maize | plastid | 16.81 | 20.53 |
| Zm00001d008406_P002 | Maize | plastid | 16.81 | 18.42 |
Protein Annotations
| EntrezGene:100273451 | Gene3D:3.40.1190.20 | MapMan:35.2 | UniProt:B4FVM5 | EMBL:BT041163 | InterPro:Carboh/pur_kinase_PfkB_CS |
| EMBL:EU969368 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0016773 | InterPro:IPR029056 | ProteinID:ONM00079.1 |
| PFAM:PF00294 | PRINTS:PR00990 | ScanProsite:PS00584 | PANTHER:PTHR43085 | PANTHER:PTHR43085:SF1 | InterPro:PfkB_dom |
| InterPro:Ribo/fructo_kinase | InterPro:Ribokinase-like | SUPFAM:SSF53613 | UniParc:UPI00017B7BE8 | EnsemblPlantsGene:Zm00001d030048 | EnsemblPlants:Zm00001d030048_P001 |
| EnsemblPlants:Zm00001d030048_T001 | SEG:seg | : | : | : | : |
Description
pfkB-like carbohydrate kinase family protein
Coordinates
chr1:-:102060297..102063588
Molecular Weight (calculated)
48806.9 Da
IEP (calculated)
6.292
GRAVY (calculated)
-0.087
Length
458 amino acids
Sequence
(BLAST)
(BLAST)
001: MALTTASTVS SPSRIIRRFS SSQDSRPPSS LLHLAPRRGP GNSPRACSWH RLVVRRMGWA ARALLGGLSD AGASESDEEE EHVLRVGQRE GEIDDAVELS
101: AAAVGPERWD VLGLGQAMVD FSGMVDDEFL DRLGIEKGTR KVINHEERGR VLRAMDGCSY KAAAGGSLSN SLVALARLGS SQSAGYPELN IVMGGSVGSD
201: PLGSFYRAKL RRANVHFLSK PVKDGTTGTV IVLTTPDAQR TMLAYQGTSS TLSYDSDLAS LVSKSNVLIV EGYLFELPHT IEAIKQACED AHKNGAIIAV
301: TASDVSCIKR CYNDFRDIVR NYADILFANA NEARALCELP STDSPMSATR YLSHSVPLVS VTDGMHGSYI GVKGEAIYIP PPQCVAVDTC GAGDAYASGI
401: LYGVLRGASD LKGIGLLASR VAAVVVGQQG TRLRVQDADR LAGSFEHHLD SLEFCSDV
101: AAAVGPERWD VLGLGQAMVD FSGMVDDEFL DRLGIEKGTR KVINHEERGR VLRAMDGCSY KAAAGGSLSN SLVALARLGS SQSAGYPELN IVMGGSVGSD
201: PLGSFYRAKL RRANVHFLSK PVKDGTTGTV IVLTTPDAQR TMLAYQGTSS TLSYDSDLAS LVSKSNVLIV EGYLFELPHT IEAIKQACED AHKNGAIIAV
301: TASDVSCIKR CYNDFRDIVR NYADILFANA NEARALCELP STDSPMSATR YLSHSVPLVS VTDGMHGSYI GVKGEAIYIP PPQCVAVDTC GAGDAYASGI
401: LYGVLRGASD LKGIGLLASR VAAVVVGQQG TRLRVQDADR LAGSFEHHLD SLEFCSDV
001: MAFSLLSPIP TSASLFFTLS AITASNNASS SSLSRLYSLY HPKGTLRTRT ATSFFGASGN LRIVSMAENR QLVCRIGGGA GAELDDMDEG EIQRIGNEDE
101: DDDEFIQVHA NNSSAASPER WDVLGLGQAM VDFSGVVDDE FLKKLGLEKG TRKLINHEER GKLLQAMDGC SYKAAAGGSL SNTLVALARL GSQSICDRPL
201: NVAMAGSIGG DPLGSFYGTK LRRANVNFLS APIKDGTTGT VIVLTTPDAQ RTMLAYQGTS SVVNYDSCLA SLIAKTNVFV VEGYLFELPD TIRTITKACE
301: EAHRNGALVA VTASDVSCIE RHYDDFWDIV GNYADIVFAN SDEARAFCHF SAEESPISAT RYMSHFVPFV SVTDGINGSY IGVKGEAIYI PPSPCVPVDT
401: CGAGDAYASG ILYGILRGVS DLKGMGDMAA TIAATVVGQQ GTRLRVQDAV ELARSHAFRL NGSGVRTDVG S
101: DDDEFIQVHA NNSSAASPER WDVLGLGQAM VDFSGVVDDE FLKKLGLEKG TRKLINHEER GKLLQAMDGC SYKAAAGGSL SNTLVALARL GSQSICDRPL
201: NVAMAGSIGG DPLGSFYGTK LRRANVNFLS APIKDGTTGT VIVLTTPDAQ RTMLAYQGTS SVVNYDSCLA SLIAKTNVFV VEGYLFELPD TIRTITKACE
301: EAHRNGALVA VTASDVSCIE RHYDDFWDIV GNYADIVFAN SDEARAFCHF SAEESPISAT RYMSHFVPFV SVTDGINGSY IGVKGEAIYI PPSPCVPVDT
401: CGAGDAYASG ILYGILRGVS DLKGMGDMAA TIAATVVGQQ GTRLRVQDAV ELARSHAFRL NGSGVRTDVG S
Arabidopsis Description
NARA5AT4g27600/T29A15_90 [Source:UniProtKB/TrEMBL;Acc:Q940Y6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.