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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • vacuole 1
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH68874 Soybean cytosol 100.0 100.0
VIT_02s0025g01050.t01 Wine grape cytosol 100.0 100.0
VIT_08s0040g00040.t01 Wine grape cytosol 99.32 99.32
VIT_15s0046g01400.t01 Wine grape cytosol 99.32 99.32
VIT_06s0004g08200.t01 Wine grape cytosol 97.3 97.3
VIT_19s0015g01190.t01 Wine grape cytosol 94.59 94.59
VIT_03s0038g02390.t01 Wine grape cytosol 92.57 92.57
VIT_06s0004g00730.t01 Wine grape plastid 52.03 43.75
VIT_08s0032g00310.t01 Wine grape mitochondrion, nucleus 43.92 42.76
VIT_19s0014g01460.t01 Wine grape cytosol 44.59 42.58
VIT_17s0000g05820.t01 Wine grape mitochondrion, nucleus 43.24 42.11
VIT_12s0028g02220.t01 Wine grape extracellular 48.65 39.13
VIT_01s0026g01770.t01 Wine grape plastid 43.92 34.03
VIT_14s0108g00140.t01 Wine grape cytosol, plastid 30.41 20.74
Protein Annotations
EntrezGene:100248397wikigene:100248397EntrezGene:100262210wikigene:100262210MapMan:19.2.2.5.2Gene3D:3.10.110.10
ProteinID:AAU04836ProteinID:AAU04836.1EMBL:AY684132ProteinID:CBI22557ProteinID:CBI22557.3ProteinID:CBI34447
ProteinID:CBI34447.3UniProt:D7TVC2EMBL:FN595243EMBL:FN596251GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0016740InterPro:IPR000608InterPro:IPR016135
EntrezGene:LOC100248397wikigene:LOC100248397EntrezGene:LOC100262210wikigene:LOC100262210PFAM:PF00179ScanProsite:PS00183
PFscan:PS50127PANTHER:PTHR24068PANTHER:PTHR24068:SF68SMART:SM00212SUPFAM:SSF54495TIGR:TC51894
InterPro:UBQ-conjugat_E2InterPro:UBQ-conjugating_ASInterPro:UBQ-conjugating_enzyme/RWDUniParc:UPI00015CCCD1ArrayExpress:VIT_16s0050g02410EnsemblPlantsGene:VIT_16s0050g02410
EnsemblPlants:VIT_16s0050g02410.t01unigene:Vvi.3243RefSeq:XP_002267153RefSeq:XP_002267153.1RefSeq:XP_002274274.1RefSeq:XP_010658920.1
Description
No Description!
Coordinates
chr16:-:19347138..19354229
Molecular Weight (calculated)
16549.0 Da
IEP (calculated)
8.069
GRAVY (calculated)
-0.312
Length
148 amino acids
Sequence
(BLAST)
001: MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP PDSPYAGGVF LVTIHFPPDY PFKPPKVAFR TKVFHPNINS NGSICLDILK EQWSPALTIS
101: KVLLSICSLL TDPNPDDPLV PEIAHMYKTD RSKYETTARS WTQKYAMG
Best Arabidopsis Sequence Match ( AT1G64230.1 )
(BLAST)
001: MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP SDSPYSGGVF LVTIHFPPDY PFKPPKVAFR TKVFHPNVNS NGSICLDILK EQWSPALTIS
101: KVLLSICSLL TDPNPDDPLV PEIAHMYKTD RAKYESTARS WTQKYAMG
Arabidopsis Description
UBC28Ubiquitin-conjugating enzyme 28 [Source:UniProtKB/TrEMBL;Acc:F4I5B8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.