Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d031819_P001 | Maize | cytosol, nucleus, plastid | 45.81 | 93.09 |
| Zm00001d040569_P002 | Maize | cytosol | 68.59 | 72.98 |
| Zm00001d028812_P010 | Maize | nucleus | 48.95 | 44.95 |
| Os03t0300200-01 | Rice | nucleus | 44.5 | 40.57 |
| TraesCS4B01G188000.1 | Wheat | nucleus | 42.41 | 38.48 |
| TraesCS2D01G317600.1 | Wheat | nucleus | 42.15 | 38.42 |
| TraesCS4D01G189400.1 | Wheat | nucleus | 41.88 | 38.19 |
| TraesCS1B01G115400.1 | Wheat | nucleus | 41.88 | 38.0 |
| Zm00001d047689_P002 | Maize | nucleus | 47.38 | 36.86 |
| HORVU4Hr1G054890.2 | Barley | nucleus | 41.62 | 36.14 |
| TraesCS4A01G116200.2 | Wheat | nucleus | 41.88 | 35.56 |
| GSMUA_Achr6P05130_001 | Banana | mitochondrion, nucleus | 31.94 | 23.15 |
| Zm00001d035481_P001 | Maize | nucleus | 9.42 | 21.95 |
Protein Annotations
| Gene3D:1.25.40.180 | Gene3D:2.30.30.30 | Gene3D:3.30.60.180 | MapMan:35.2 | UniProt:A0A1D6EI12 | InterPro:CNOT1_CAF1_bind |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0046872 | InterPro:IPR002893 | InterPro:IPR014722 | InterPro:IPR016021 | InterPro:KOW | InterPro:MIF4-like_sf |
| ProteinID:ONM19753.1 | InterPro:PDCD2_C | PFAM:PF00467 | PFAM:PF01753 | PFAM:PF04194 | PFAM:PF16415 |
| PFscan:PS50865 | PANTHER:PTHR13162 | PANTHER:PTHR13162:SF9 | InterPro:Rib_L2_dom2 | SUPFAM:SSF144232 | UniParc:UPI0008434FFB |
| EnsemblPlantsGene:Zm00001d004890 | EnsemblPlants:Zm00001d004890_P001 | EnsemblPlants:Zm00001d004890_T001 | InterPro:Znf_MYND | SEG:seg | : |
Description
zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein
Coordinates
chr2:+:147021230..147025006
Molecular Weight (calculated)
42785.9 Da
IEP (calculated)
9.039
GRAVY (calculated)
-0.234
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MMARAAAGGK DRDGVGGGRG GLVKIRPYQI KFRGALLAKN LGSWLGKFTI GRNQALRAKE IDPKSLIVEA YEKGLMIAVI PFTSKILEPC QSSIAYRPPN
101: PWTMGILSLL AEIYNLPNLK MNLKFDIEVL FKNLTVDILM ELVNVTKFFQ MPKYLLPAHV CHWCGTWKGD KICSSCKKAR YCSEKHQALH WGTGHKNDCL
201: QIISSSAASN SVLPTVGKVP ANTSWPKFEI KIDYEGIFDS DSGDENNSKL LVMQRHGKPD AMMESWMDQF EADSDNKCWT SFQERVSRAP NQVLRYCREP
301: NAKPLWALSS GCPSNVDIPS CSYCKDPLCY EFQARIIKFD VDNVVMVTGG RNTGRVGVIK NREKHKASFE TIHVLLGAFC YV
101: PWTMGILSLL AEIYNLPNLK MNLKFDIEVL FKNLTVDILM ELVNVTKFFQ MPKYLLPAHV CHWCGTWKGD KICSSCKKAR YCSEKHQALH WGTGHKNDCL
201: QIISSSAASN SVLPTVGKVP ANTSWPKFEI KIDYEGIFDS DSGDENNSKL LVMQRHGKPD AMMESWMDQF EADSDNKCWT SFQERVSRAP NQVLRYCREP
301: NAKPLWALSS GCPSNVDIPS CSYCKDPLCY EFQARIIKFD VDNVVMVTGG RNTGRVGVIK NREKHKASFE TIHVLLGAFC YV
0001: MYSKTIENPD ETSPRIMWAL KRVSYSRGST ENPRRKSPSP VVPGISDLGF PYLMTPSKVA GHTRFLLHSF HDSDVDSIAL QLSQFVDFGV ETSIPVLKTC
0101: LDCFTARRSH PNSLQLEKVV SLLFKHVLKL SNLATLLPHA LNDFELTQES VDDLTTTLNF SISENIGFAL ALTDFERLDA KTTGRNLLLA QIEQLCANTG
0201: QILSSELIHS VLSFLRKSED LSMHLDSFLQ FLSSAQPRDD FSFALTPMLA QQVHEAPVFR SMDFHTDSAD NDLDAILAEI DKEVSVGDLM GELGCGFTAD
0301: AQQCKEILSS FAPLGEATIS RIVGNVSRTC ADLEDNQTTF STFTVALGSC IPTELPTPRS WNVDILVDTI KQLQAPGISW RKVIENLDHD GFDIPNMESF
0401: SFFMRIYKAA CKEPFPLDAV CGSVWKNMDG QLSFLKHAIS APPEVFTFMH SPRKLVYIDN MHSQEQQLGL SNHAWLSLDL LDVLCQLAER GHAVLVSSLL
0501: QYPLTQCPRT LLLGMTHIKT AYNLIQREVV SAILPVIITS PQDSGFIHNL WHQNAELVLW GIIDAQHLKA DSMLRIIEIC HELKILSVVL ESVPVSSSIR
0601: LAVLASLRGL LDIENWLPNC LYMYKDLFAE ECLKFVKNVH FSESDDFRAK IFHPSDPLSD LHLEATTSLL KVLKAHDNAI TSSQLVEEIE KVNAAILDCN
0701: PKLQNGEAKD SSAPNAYGDD VEAEANAYFH QMFSSHLSVD AMVQMLSRYK ESLVPREKLI FECMIANLFE EYRFFPKYPE RQLKIASILF GSVIKHQLIS
0801: SLTLGMALRL VLDSLRKPAD SKMFLFGSKA LEQFVNRLVE LPQYCNHILQ ISHLRSTHPE LVTVIEQALS RISSGNLESD ASVSHPGPSQ SFPGNGELSG
0901: SGIGQPALQL SSPLQLQQKN EVPSVPSNEA KPLLPSLSTT SVDVSVNPKN PGIPTSSSTS TGFVRPARAT TSTRFGSALN IETLVAAAER RENAIEAPPS
1001: DVQDKVSFII NNISTTNIES KGKEFAEILP QQYYPWFAQY MVMKRASIEP NFHDLYLKFL DKVDSKLLFK EILQNTYENC KVLLGSELIK SSSEERSLLK
1101: NLGSWLGRLT IGRNYVLRAR EIDPKSLIVE AYEKGLMIAV IPFTSKVLEP CQNSIAYQPP NPWTMAILGL LAEIYSMPNL KMNLKFDIEV LFKNLGVEMK
1201: EVVPTSLLKD RKREIDGNPD FSNKDPGVTQ ISQPQMIPEP KTISPLKQID LPLDVANSPN TDVPSKLLSQ YVAPQRVYTN TLMDEEKVAT LGLPEQLPSP
1301: QGLFQSTPSP LFSISQLSAA LPNIGNHVVI NQKLSAFGMH FPFQRVVPLA MDRAIKEIVS GIVQRSVCIA CQTTKELVLK DYALEPDESR IYNAAHLMVA
1401: SLAGSLAHVT CKEPLRTSIS GHLRNSLQGL NISNDALEQI VQLVTNDNLD LGCAAIEQAA TEKAIQTIDA DIAQQLLLRR KHRDGAGSSF FDPNILSQNS
1501: VSFIPESLRP KPGHLSLSQQ RVYEDFVQHP WQKQSTQTSH GLSAASSSSG DVALGSGYGP VSGKVASEFL SNAGNARMDM VSRPSDISVD GFESSPVSLL
1601: SSQVDPAGDS SSLQFTKSLP TSELNLAESS DAATKETGTS LQTLTSAATM ERLGASNITQ PSLSTRDALD KCQIVTQKME ELVANNAGDD EIQAVISEVP
1701: EIILRCISRD EAAFAVAQKA FKALYENASS NLHVSANLAI LVAIRDVCKR VVKELTSWVI YSEEDRKLNK DITIGLIQRE LLSLAEYNVH MAKHLDGGRN
1801: KTATDFAISL LQSLVTEESS VISELHSLVD ALAKLASKSG SSESLQQLID IIRNPVTNTA GLSDSSTGND NNDRQKDEKV ACNTTNTEES TSLDYVESDP
1901: AGFQNRVSTL FKNWYQICEL PGANETACSQ YVLHLHQTGL LKGDDTTESF FRILLELSVA HCISSEDINS GAVQSPQQPQ SPSFLIIDMY AKLVFSILKY
2001: FPEQESSSRL FLLSEIMADT VRFIQKDAED KKTSLNSKPY FRLFINWLLD LCSLDPGTDG ANFQVLTAFA NAFHALQPLK IPAFSFAWLE LVSHRSFMPK
2101: LLTVNGQKGW PYVQRLLVDL LQFLEPFLRN AELGGPVHFL YKGTLRVLLV LLHDFPEFLC DYHFTFCDVI PSSCIQMRNI ILSSFPRNMR LPDPSTPNLK
2201: IDLLPEIVEA PCILSEVDAA LKAKQMKNDV DEYLTSRQQN STFLSELKTK LLLSSSEASS AGTRYSVPLI NSLVLYTGMQ AIQQLQAGET QAQNVVALQM
2301: FKYLSMELDT EGRYLFLNAI ANQLRYPNNH THYFSFIMLY LFFESDQEII QEQITRVLLE RLIVNRPHPW GLLITFIELI KNPRYSFWKQ AFIRCAPEIE
2401: KLFESVARSC GGLKPVDEGM VSGGWVSDNS H
0101: LDCFTARRSH PNSLQLEKVV SLLFKHVLKL SNLATLLPHA LNDFELTQES VDDLTTTLNF SISENIGFAL ALTDFERLDA KTTGRNLLLA QIEQLCANTG
0201: QILSSELIHS VLSFLRKSED LSMHLDSFLQ FLSSAQPRDD FSFALTPMLA QQVHEAPVFR SMDFHTDSAD NDLDAILAEI DKEVSVGDLM GELGCGFTAD
0301: AQQCKEILSS FAPLGEATIS RIVGNVSRTC ADLEDNQTTF STFTVALGSC IPTELPTPRS WNVDILVDTI KQLQAPGISW RKVIENLDHD GFDIPNMESF
0401: SFFMRIYKAA CKEPFPLDAV CGSVWKNMDG QLSFLKHAIS APPEVFTFMH SPRKLVYIDN MHSQEQQLGL SNHAWLSLDL LDVLCQLAER GHAVLVSSLL
0501: QYPLTQCPRT LLLGMTHIKT AYNLIQREVV SAILPVIITS PQDSGFIHNL WHQNAELVLW GIIDAQHLKA DSMLRIIEIC HELKILSVVL ESVPVSSSIR
0601: LAVLASLRGL LDIENWLPNC LYMYKDLFAE ECLKFVKNVH FSESDDFRAK IFHPSDPLSD LHLEATTSLL KVLKAHDNAI TSSQLVEEIE KVNAAILDCN
0701: PKLQNGEAKD SSAPNAYGDD VEAEANAYFH QMFSSHLSVD AMVQMLSRYK ESLVPREKLI FECMIANLFE EYRFFPKYPE RQLKIASILF GSVIKHQLIS
0801: SLTLGMALRL VLDSLRKPAD SKMFLFGSKA LEQFVNRLVE LPQYCNHILQ ISHLRSTHPE LVTVIEQALS RISSGNLESD ASVSHPGPSQ SFPGNGELSG
0901: SGIGQPALQL SSPLQLQQKN EVPSVPSNEA KPLLPSLSTT SVDVSVNPKN PGIPTSSSTS TGFVRPARAT TSTRFGSALN IETLVAAAER RENAIEAPPS
1001: DVQDKVSFII NNISTTNIES KGKEFAEILP QQYYPWFAQY MVMKRASIEP NFHDLYLKFL DKVDSKLLFK EILQNTYENC KVLLGSELIK SSSEERSLLK
1101: NLGSWLGRLT IGRNYVLRAR EIDPKSLIVE AYEKGLMIAV IPFTSKVLEP CQNSIAYQPP NPWTMAILGL LAEIYSMPNL KMNLKFDIEV LFKNLGVEMK
1201: EVVPTSLLKD RKREIDGNPD FSNKDPGVTQ ISQPQMIPEP KTISPLKQID LPLDVANSPN TDVPSKLLSQ YVAPQRVYTN TLMDEEKVAT LGLPEQLPSP
1301: QGLFQSTPSP LFSISQLSAA LPNIGNHVVI NQKLSAFGMH FPFQRVVPLA MDRAIKEIVS GIVQRSVCIA CQTTKELVLK DYALEPDESR IYNAAHLMVA
1401: SLAGSLAHVT CKEPLRTSIS GHLRNSLQGL NISNDALEQI VQLVTNDNLD LGCAAIEQAA TEKAIQTIDA DIAQQLLLRR KHRDGAGSSF FDPNILSQNS
1501: VSFIPESLRP KPGHLSLSQQ RVYEDFVQHP WQKQSTQTSH GLSAASSSSG DVALGSGYGP VSGKVASEFL SNAGNARMDM VSRPSDISVD GFESSPVSLL
1601: SSQVDPAGDS SSLQFTKSLP TSELNLAESS DAATKETGTS LQTLTSAATM ERLGASNITQ PSLSTRDALD KCQIVTQKME ELVANNAGDD EIQAVISEVP
1701: EIILRCISRD EAAFAVAQKA FKALYENASS NLHVSANLAI LVAIRDVCKR VVKELTSWVI YSEEDRKLNK DITIGLIQRE LLSLAEYNVH MAKHLDGGRN
1801: KTATDFAISL LQSLVTEESS VISELHSLVD ALAKLASKSG SSESLQQLID IIRNPVTNTA GLSDSSTGND NNDRQKDEKV ACNTTNTEES TSLDYVESDP
1901: AGFQNRVSTL FKNWYQICEL PGANETACSQ YVLHLHQTGL LKGDDTTESF FRILLELSVA HCISSEDINS GAVQSPQQPQ SPSFLIIDMY AKLVFSILKY
2001: FPEQESSSRL FLLSEIMADT VRFIQKDAED KKTSLNSKPY FRLFINWLLD LCSLDPGTDG ANFQVLTAFA NAFHALQPLK IPAFSFAWLE LVSHRSFMPK
2101: LLTVNGQKGW PYVQRLLVDL LQFLEPFLRN AELGGPVHFL YKGTLRVLLV LLHDFPEFLC DYHFTFCDVI PSSCIQMRNI ILSSFPRNMR LPDPSTPNLK
2201: IDLLPEIVEA PCILSEVDAA LKAKQMKNDV DEYLTSRQQN STFLSELKTK LLLSSSEASS AGTRYSVPLI NSLVLYTGMQ AIQQLQAGET QAQNVVALQM
2301: FKYLSMELDT EGRYLFLNAI ANQLRYPNNH THYFSFIMLY LFFESDQEII QEQITRVLLE RLIVNRPHPW GLLITFIELI KNPRYSFWKQ AFIRCAPEIE
2401: KLFESVARSC GGLKPVDEGM VSGGWVSDNS H
Arabidopsis Description
Transcription regulator [Source:UniProtKB/TrEMBL;Acc:F4HVV6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.