Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d050876_P001 | Maize | cytosol | 28.93 | 42.17 |
| Zm00001d021898_P001 | Maize | cytosol | 75.21 | 26.76 |
| Zm00001d041757_P001 | Maize | cytosol | 73.55 | 26.18 |
| Zm00001d035787_P001 | Maize | cytosol | 33.88 | 24.85 |
| KRH02540 | Soybean | cytosol | 69.42 | 24.49 |
| KRH19405 | Soybean | cytosol | 69.42 | 24.42 |
| Zm00001d044629_P001 | Maize | nucleus | 42.15 | 13.46 |
| Zm00001d016839_P001 | Maize | plastid | 23.97 | 9.97 |
| Zm00001d044278_P001 | Maize | cytosol | 19.83 | 8.16 |
| Zm00001d010986_P001 | Maize | vacuole | 23.97 | 8.1 |
| Zm00001d016055_P001 | Maize | plastid | 8.26 | 3.64 |
Protein Annotations
| EnsemblPlants:Zm00001d006656_P001 | EnsemblPlants:Zm00001d006656_T001 | EnsemblPlantsGene:Zm00001d006656 | Gene3D:3.40.50.300 | InterPro:DNA_recomb/repair_Rad51_C | InterPro:P-loop_NTPase |
| PANTHER:PTHR22942 | PANTHER:PTHR22942:SF45 | PFAM:PF08423 | ProteinID:ONM24664.1 | SEG:seg | SUPFAM:SSF52540 |
| UniParc:UPI000843DDF1 | UniProt:A0A1D6EZG3 | MapMan:35.1 | : | : | : |
Description
DNA repair protein RAD51 homolog 1
Coordinates
chr2:-:213605594..213606086
Molecular Weight (calculated)
13188.2 Da
IEP (calculated)
8.495
GRAVY (calculated)
0.263
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTDNSGPSC VLDLYICRFA LMVVDSATVL YRTDFSGRGE LSARQMHMAK FLRSLQKLAD EFGVVVITNQ VVAQVDGSAM FAGPQFKPIG GNIMAHASTT
101: RCIAPPPVDH KLVIIYIQAL N
101: RCIAPPPVDH KLVIIYIQAL N
001: MTTMEQRRNQ NAVQQQDDEE TQHGPFPVEQ LQAAGIASVD VKKLRDAGLC TVEGVAYTPR KDLLQIKGIS DAKVDKIVEA ASKLVPLGFT SASQLHAQRQ
101: EIIQITSGSR ELDKVLEGGI ETGSITELYG EFRSGKTQLC HTLCVTCQLP MDQGGGEGKA MYIDAEGTFR PQRLLQIADR FGLNGADVLE NVAYARAYNT
201: DHQSRLLLEA ASMMIETRFA LLIVDSATAL YRTDFSGRGE LSARQMHLAK FLRSLQKLAD EFGVAVVITN QVVAQVDGSA LFAGPQFKPI GGNIMAHATT
301: TRLALRKGRA EERICKVISS PCLPEAEARF QISTEGVTDC KD
101: EIIQITSGSR ELDKVLEGGI ETGSITELYG EFRSGKTQLC HTLCVTCQLP MDQGGGEGKA MYIDAEGTFR PQRLLQIADR FGLNGADVLE NVAYARAYNT
201: DHQSRLLLEA ASMMIETRFA LLIVDSATAL YRTDFSGRGE LSARQMHLAK FLRSLQKLAD EFGVAVVITN QVVAQVDGSA LFAGPQFKPI GGNIMAHATT
301: TRLALRKGRA EERICKVISS PCLPEAEARF QISTEGVTDC KD
Arabidopsis Description
RAD51DNA repair protein RAD51 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P94102]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.