Factsheet for Zm00001d010986_P001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

cytosol 1
extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, mitochondrion, secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18935	Sorghum	cytosol, peroxisome, plastid	89.11	87.64
HORVU1Hr1G011840.1	Barley	cytosol, nucleus, plastid	80.45	78.05
TraesCS1B01G075900.1	Wheat	cytosol, peroxisome, plastid	80.45	78.05
TraesCS1A01G058500.1	Wheat	cytosol, nucleus, plastid	79.61	77.87
TraesCS1D01G059600.2	Wheat	cytosol, peroxisome, plastid	80.45	77.63
Os05t0121700-02	Rice	cytosol, mitochondrion, nucleus, plastid	78.21	77.14
PGSC0003DMT400065320	Potato	cytosol, extracellular, plastid	11.17	57.97
Solyc11g072610.1.1	Tomato	cytosol, golgi, plastid	60.06	57.95
GSMUA_Achr8P21040_001	Banana	nucleus	59.78	56.91
VIT_06s0004g03600.t01	Wine grape	cytosol, nucleus, plastid	57.54	55.53
PGSC0003DMT400065314	Potato	cytosol	32.96	53.88
AT2G28560.1	Thale cress	cytosol, nucleus, plastid	55.03	53.1
KRH10360	Soybean	mitochondrion, nucleus, plastid	55.59	52.65
CDY53383	Canola	cytosol	53.91	42.05
CDX77188	Canola	cytosol	53.07	41.39
Bra035691.1-P	Field mustard	cytosol	53.63	41.38
Zm00001d050876_P001	Maize	cytosol	6.98	30.12
Zm00001d044278_P001	Maize	cytosol	21.51	26.19
Zm00001d021898_P001	Maize	cytosol	24.58	25.88
Zm00001d041757_P001	Maize	cytosol	24.58	25.88
Zm00001d016839_P001	Maize	plastid	19.83	24.4
Zm00001d006656_P001	Maize	cytosol	8.1	23.97
Zm00001d035787_P001	Maize	cytosol	10.89	23.64
Zm00001d044629_P001	Maize	nucleus	23.74	22.43
Zm00001d016055_P001	Maize	plastid	12.57	16.36

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A1D6FVE8	InterPro:AAA+_ATPase	ProteinID:AQK95417.1	InterPro:DNA_recomb/repair_Rad51_C
InterPro:DNA_recomb/repair_RecA-like	GO:GO:0000166	GO:GO:0000724	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006259	GO:GO:0006281	GO:GO:0006950	GO:GO:0008094
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0033063	InterPro:IPR020588
InterPro:P-loop_NTPase	PFAM:PF08423	PIRSF:PIRSF005856	PFscan:PS50162	PANTHER:PTHR22942	PANTHER:PTHR22942:SF15
InterPro:RAD51B	InterPro:RecA_ATP-bd	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0008426DE6	EnsemblPlantsGene:Zm00001d010986
EnsemblPlants:Zm00001d010986_P001	EnsemblPlants:Zm00001d010986_T001	SEG:seg	:	:	:

Description

recombination protein51 gene e recombination protein51 gene e

Coordinates

chr8:+:135932034..135940852

Molecular Weight (calculated)

38920.5 Da

IEP (calculated)

6.786

GRAVY (calculated)

0.190

Length

358 amino acids

Sequence
(BLAST)

001: MANMLVSEMR LPLYLAHLLA ARRLDTAKDV LSLPEVELMA ILDAGLPTAR AAIAHVSEAA CPPCQTALSL LEERVRLGGG GRLATMLCGL DEALGGGIPT
101: GKLTEVVGPS GIGKTQFCLK LALLAALPEY YGGLDGRVVY IDTEFKFSPR RLLKLMATVY YFQMAGRILV MRPTSLADFT KSLEEMKVTL LQHDVKLLIV
201: DSVAALMSME NEKATAGFRQ HPLRWSLSFL KSIAEFSRIP VVVTNQVRSQ SNDDGYHFSF EVDRKDGSNC AERFDSHLVA ALGIQWAHAV TVRLVFESHS
301: GHRFIKVAKS PMSPAVAFPF AVESSGITLL SDESIDVTGP DITSIRCQDI SPGQNVLA

Best Arabidopsis Sequence Match ( AT2G28560.1 )
(BLAST)

001: MANKLIGEMG LHTKISNIFA ARNIITAKDA LSMTEFELME LLDVGMKEIR SAISFISEAT SPPCQSARSL LEKKVENEHL SGHLPTHLKG LDDTLCGGIP
101: FGVLTELVGP PGIGKSQFCM KLALSASFPV AYGGLDGRVI YIDVESKFSS RRVIEMGLES FPEVFHLKGM AQEMAGRILV LRPTSLANFT ESIQELKNSI
201: LQNQVKLLVI DSMTALLSGE NKPGAQRQPQ LGWHISFLKS LAEFSRIPIV VTNQVRSQNR DETSQYSFQA KVKDEFKDNT KTYDSHLVAA LGINWAHAVT
301: IRLVLEAKSG QRIIKVAKSP MSPPLAFPFH ITSAGISLLS DNGTELKGPG INTIHARGIV DPDYVALFRT F

Arabidopsis Description

ATRAD51BDNA repair (Rad51) family protein [Source:TAIR;Acc:AT2G28560]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.