Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d010986_P001 | Maize | vacuole | 87.64 | 89.11 |
| HORVU1Hr1G011840.1 | Barley | cytosol, nucleus, plastid | 84.34 | 83.2 |
| TraesCS1B01G075900.1 | Wheat | cytosol, peroxisome, plastid | 84.34 | 83.2 |
| TraesCS1D01G059600.2 | Wheat | cytosol, peroxisome, plastid | 84.62 | 83.02 |
| TraesCS1A01G058500.1 | Wheat | cytosol, nucleus, plastid | 83.24 | 82.79 |
| Os05t0121700-02 | Rice | cytosol, mitochondrion, nucleus, plastid | 82.42 | 82.64 |
| Solyc11g072610.1.1 | Tomato | cytosol, golgi, plastid | 61.54 | 60.38 |
| GSMUA_Achr8P21040_001 | Banana | nucleus | 62.36 | 60.37 |
| PGSC0003DMT400065314 | Potato | cytosol | 35.44 | 58.9 |
| VIT_06s0004g03600.t01 | Wine grape | cytosol, nucleus, plastid | 58.79 | 57.68 |
| PGSC0003DMT400065320 | Potato | cytosol, extracellular, plastid | 10.71 | 56.52 |
| KRH10360 | Soybean | mitochondrion, nucleus, plastid | 56.87 | 54.76 |
| AT2G28560.1 | Thale cress | cytosol, nucleus, plastid | 55.77 | 54.72 |
| CDY53383 | Canola | cytosol | 55.77 | 44.23 |
| CDX77188 | Canola | cytosol | 54.95 | 43.57 |
| Bra035691.1-P | Field mustard | cytosol | 55.49 | 43.53 |
| KXG31586 | Sorghum | cytosol | 20.6 | 26.6 |
| OQU84696 | Sorghum | nucleus | 23.63 | 25.0 |
| OQU79150 | Sorghum | cytosol | 23.63 | 24.43 |
| EER99597 | Sorghum | cytosol | 23.08 | 24.42 |
| OQU78622 | Sorghum | nucleus | 22.25 | 24.11 |
| OQU83843 | Sorghum | cytosol | 23.08 | 24.07 |
| OQU85146 | Sorghum | plastid | 18.13 | 20.75 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | EntrezGene:8071245 | InterPro:AAA+_ATPase | UniProt:C5YZ24 | InterPro:DNA_recomb/repair_Rad51_C |
| InterPro:DNA_recomb/repair_RecA-like | EnsemblPlants:EES18935 | ProteinID:EES18935 | ProteinID:EES18935.1 | GO:GO:0000003 | GO:GO:0000150 |
| GO:GO:0000166 | GO:GO:0000400 | GO:GO:0000707 | GO:GO:0000724 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003690 | GO:GO:0003697 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004520 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005657 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006312 | GO:GO:0006950 |
| GO:GO:0007049 | GO:GO:0007131 | GO:GO:0008094 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009628 |
| GO:GO:0009987 | GO:GO:0010212 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0033063 | GO:GO:0042148 |
| InterPro:IPR020588 | InterPro:P-loop_NTPase | PFAM:PF08423 | PIRSF:PIRSF005856 | PFscan:PS50162 | PANTHER:PTHR22942 |
| PANTHER:PTHR22942:SF15 | InterPro:RAD51B | InterPro:RecA_ATP-bd | SMART:SM00382 | EnsemblPlantsGene:SORBI_3009G024800 | SUPFAM:SSF52540 |
| UniParc:UPI0001A88AF4 | RefSeq:XP_002440505.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:2217737..2228783
Molecular Weight (calculated)
39541.3 Da
IEP (calculated)
7.253
GRAVY (calculated)
0.131
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MANMPVSEMR LPPHLAHLLA ARRLDTAKDV LSLPEVELMA ILDAGLPTAR AAVALVSEAA CPPCQTALAL LEERVRLGGG GRLATTLCGL DEALGGGIPM
101: GKLTEVVGPS GIGKTQFCLK LALLAALPEY YGGLDGRVVY IDTEFKFSSR RMIEIGQKSF PQIFRQEGLA QKMAGRILVI RPTTLADFTK SLEEMKVTLL
201: QHDVKLLIVD SMAALMSLEN EKVTAGFSQH PLRWTLSFLK SIAEFSRIPV VVTNQVRSQS NDDGYHFSFE VDKKDGNKCA EKFDSHLVAA LGIQWAHAIT
301: VRLVFESHSG HRFIKVAKSP MSPAVAFPFV VESSGITLLS DESIDVTGPE ITSIRCQGQN VLSR
101: GKLTEVVGPS GIGKTQFCLK LALLAALPEY YGGLDGRVVY IDTEFKFSSR RMIEIGQKSF PQIFRQEGLA QKMAGRILVI RPTTLADFTK SLEEMKVTLL
201: QHDVKLLIVD SMAALMSLEN EKVTAGFSQH PLRWTLSFLK SIAEFSRIPV VVTNQVRSQS NDDGYHFSFE VDKKDGNKCA EKFDSHLVAA LGIQWAHAIT
301: VRLVFESHSG HRFIKVAKSP MSPAVAFPFV VESSGITLLS DESIDVTGPE ITSIRCQGQN VLSR
001: MANKLIGEMG LHTKISNIFA ARNIITAKDA LSMTEFELME LLDVGMKEIR SAISFISEAT SPPCQSARSL LEKKVENEHL SGHLPTHLKG LDDTLCGGIP
101: FGVLTELVGP PGIGKSQFCM KLALSASFPV AYGGLDGRVI YIDVESKFSS RRVIEMGLES FPEVFHLKGM AQEMAGRILV LRPTSLANFT ESIQELKNSI
201: LQNQVKLLVI DSMTALLSGE NKPGAQRQPQ LGWHISFLKS LAEFSRIPIV VTNQVRSQNR DETSQYSFQA KVKDEFKDNT KTYDSHLVAA LGINWAHAVT
301: IRLVLEAKSG QRIIKVAKSP MSPPLAFPFH ITSAGISLLS DNGTELKGPG INTIHARGHS DMINFHGDCS
101: FGVLTELVGP PGIGKSQFCM KLALSASFPV AYGGLDGRVI YIDVESKFSS RRVIEMGLES FPEVFHLKGM AQEMAGRILV LRPTSLANFT ESIQELKNSI
201: LQNQVKLLVI DSMTALLSGE NKPGAQRQPQ LGWHISFLKS LAEFSRIPIV VTNQVRSQNR DETSQYSFQA KVKDEFKDNT KTYDSHLVAA LGINWAHAVT
301: IRLVLEAKSG QRIIKVAKSP MSPPLAFPFH ITSAGISLLS DNGTELKGPG INTIHARGHS DMINFHGDCS
Arabidopsis Description
ATRAD51BDNA repair (Rad51) family protein [Source:TAIR;Acc:AT2G28560]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.