Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G014420.2 | Barley | nucleus | 53.75 | 58.11 |
| TraesCS6B01G113800.1 | Wheat | nucleus | 53.75 | 56.33 |
| TraesCS6A01G083300.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 52.08 | 55.31 |
| Os02t0125400-01 | Rice | mitochondrion | 57.5 | 54.55 |
| Zm00001d002788_P001 | Maize | cytosol | 41.67 | 48.31 |
| Zm00001d017441_P001 | Maize | cytosol | 41.67 | 47.85 |
| OQU84271 | Sorghum | plastid | 74.58 | 46.02 |
| Zm00001d029970_P001 | Maize | nucleus | 39.58 | 42.04 |
| Zm00001d038133_P002 | Maize | nucleus | 32.08 | 32.63 |
| Zm00001d002733_P001 | Maize | cytosol | 30.42 | 30.8 |
| Zm00001d026360_P001 | Maize | cytosol | 31.67 | 26.95 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.7 | UniProt:A0A1D6GZ97 | ProteinID:AQK68065.1 | InterPro:Cyclin-like_sf | InterPro:Cyclin_PHO80-like |
| GO:GO:0000079 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0007049 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0019901 | PFAM:PF08613 |
| PANTHER:PTHR15615 | PANTHER:PTHR15615:SF68 | SUPFAM:SSF47954 | UniParc:UPI00022172C9 | EnsemblPlantsGene:Zm00001d015092 | EnsemblPlants:Zm00001d015092_P001 |
| EnsemblPlants:Zm00001d015092_T001 | SEG:seg | : | : | : | : |
Description
Cyclin-U4-2
Coordinates
chr5:+:75195775..75197572
Molecular Weight (calculated)
25681.6 Da
IEP (calculated)
7.099
GRAVY (calculated)
-0.123
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEPPPGSSK AAAARAPRVV GVLAGLLERA AERGDTATPT LADSAFRGRA LPGIPVRRYA ERIYRYAGCS PACYVLAYVY LDRLARGQCD AGAGEDEDED
101: EAAVVGIDSY TVHRLLITSV LVAAKFMDDR HHNNAYFARV GGVEVAEMNA LELRLLFALR FRLNVAPDTF ARYCAALECH VDTPDAGGPV PRMPPSSHVD
201: GEEAVTSSKG KVAAAGGGSV VVQRSHRQRR AVVQIMTTAQ
101: EAAVVGIDSY TVHRLLITSV LVAAKFMDDR HHNNAYFARV GGVEVAEMNA LELRLLFALR FRLNVAPDTF ARYCAALECH VDTPDAGGPV PRMPPSSHVD
201: GEEAVTSSKG KVAAAGGGSV VVQRSHRQRR AVVQIMTTAQ
001: MADQIEIQRM NQDLQEPLAE IMPSVLTAMS YLLQRVSETN DNLSQKQKPS SFTGVTKPSI SIRSYLERIF EYANCSYSCY IVAYIYLDRF VKKQPFLPIN
101: SFNVHRLIIT SVLVSAKFMD DLSYNNEYYA KVGGISREEM NMLELDFLFG IGFELNVTVS TFNNYCCFLQ REMAMLMKMK SLFLEPSSFK ISSKTKLVMY
201: PHEEDSLSTH HNKKQLAAA
101: SFNVHRLIIT SVLVSAKFMD DLSYNNEYYA KVGGISREEM NMLELDFLFG IGFELNVTVS TFNNYCCFLQ REMAMLMKMK SLFLEPSSFK ISSKTKLVMY
201: PHEEDSLSTH HNKKQLAAA
Arabidopsis Description
CYCU4-3Cyclin-U4-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKF6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.