Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- cytosol 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G014420.2 | Barley | nucleus | 60.87 | 69.37 |
| TraesCS6A01G083300.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 58.5 | 65.49 |
| TraesCS6B01G113800.1 | Wheat | nucleus | 58.89 | 65.07 |
| Zm00001d015092_P001 | Maize | nucleus | 54.55 | 57.5 |
| Os02t0652000-01 | Rice | cytosol | 41.5 | 49.53 |
| Os04t0544200-01 | Rice | nucleus | 40.71 | 48.58 |
| Os10t0563900-01 | Rice | nucleus | 38.74 | 46.23 |
| OQU84271 | Sorghum | plastid | 55.34 | 35.99 |
| Os04t0552300-01 | Rice | cytosol | 30.04 | 35.02 |
| Os05t0398000-01 | Rice | cytosol | 18.97 | 34.78 |
| Os04t0628900-00 | Rice | nucleus | 31.62 | 30.3 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.7 | EntrezGene:4328150 | ProteinID:BAD08008.1 | ProteinID:BAS76759.1 | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_PHO80-like | GO:GO:0000079 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 |
| GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0019901 |
| EnsemblPlantsGene:Os02g0125400 | EnsemblPlants:Os02t0125400-01 | PFAM:PF08613 | PANTHER:PTHR15615 | PANTHER:PTHR15615:SF68 | UniProt:Q6Z2N6 |
| SUPFAM:SSF47954 | UniParc:UPI0000236880 | RefSeq:XP_015623979.1 | SEG:seg | : | : |
Description
P-type cyclin 4;3Negative regulatory factor PREG domain containing protein. (Os02t0125400-01)
Coordinates
chr2:+:1331347..1333420
Molecular Weight (calculated)
26885.9 Da
IEP (calculated)
8.313
GRAVY (calculated)
-0.150
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MERTTTRRTS SKGAAAAPAP KVVAVLAGLL ERAAARGDAD ADARGGSAAA AAATAFRGRT RPEISVRRYA ERIYRYAGCS PACFVVARVY LDRLAGRSPE
101: EESSPSPSPP ATAAAAVCVD SYSVHRLLIT SVMVAAKFMD DIHYNNAYFA RVGGVEVAEM NGLELELLFA LRFRLNVTPA TFATYCAALE GEMAADDGPL
201: PSPSPSPEEE GNDRRQPPPR RKDGITNKVA AAVDRSALLT AAHHRVVVVE ITQ
101: EESSPSPSPP ATAAAAVCVD SYSVHRLLIT SVMVAAKFMD DIHYNNAYFA RVGGVEVAEM NGLELELLFA LRFRLNVTPA TFATYCAALE GEMAADDGPL
201: PSPSPSPEEE GNDRRQPPPR RKDGITNKVA AAVDRSALLT AAHHRVVVVE ITQ
001: MAELENPSVM SKLIAFLSSL LERVAESNDL TRRVATQSQR VSVFHGLSRP TITIQSYLER IFKYANCSPS CFVVAYVYLD RFTHRQPSLP INSFNVHRLL
101: ITSVMVAAKF LDDLYYNNAY YAKVGGISTK EMNFLELDFL FGLGFELNVT PNTFNAYFSY LQKEMTLLQP LSLVVVPSSR SLITFNDDEA SHQKQQQQQL
201: AV
101: ITSVMVAAKF LDDLYYNNAY YAKVGGISTK EMNFLELDFL FGLGFELNVT PNTFNAYFSY LQKEMTLLQP LSLVVVPSSR SLITFNDDEA SHQKQQQQQL
201: AV
Arabidopsis Description
CYCU4-1Cyclin-U4-1 [Source:UniProtKB/Swiss-Prot;Acc:O80513]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.