Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07638 | Sorghum | mitochondrion | 76.42 | 93.46 |
| Os02t0781800-02 | Rice | cytosol | 35.62 | 83.53 |
| HORVU6Hr1G082150.2 | Barley | mitochondrion | 66.56 | 81.89 |
| TraesCS6B01G371900.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 66.22 | 81.15 |
| GSMUA_Achr5P05140_001 | Banana | nucleus | 56.86 | 71.28 |
| GSMUA_AchrUn_... | Banana | nucleus | 55.02 | 69.12 |
| GSMUA_Achr1P21860_001 | Banana | cytosol | 53.85 | 67.65 |
| Zm00001d023762_P001 | Maize | mitochondrion | 52.84 | 65.42 |
| Zm00001d038513_P002 | Maize | plastid | 48.83 | 63.76 |
| Zm00001d041759_P002 | Maize | cytosol, mitochondrion | 53.68 | 63.31 |
| Zm00001d010625_P003 | Maize | plastid | 50.0 | 61.4 |
| GSMUA_Achr3P05870_001 | Banana | cytosol | 52.01 | 56.96 |
Protein Annotations
| EnsemblPlants:Zm00001d018291_P002 | EnsemblPlants:Zm00001d018291_T002 | EnsemblPlantsGene:Zm00001d018291 | PANTHER:PTHR31789 | PANTHER:PTHR31789:SF3 | ProteinID:AQK75482.1 |
| SEG:seg | SUPFAM:SSF69322 | UniParc:UPI000844BE8F | UniProt:A0A1D6HM96 | MapMan:35.2 | : |
Description
Transducin/WD40 repeat-like superfamily protein
Coordinates
chr5:-:218027092..218047348
Molecular Weight (calculated)
68482.1 Da
IEP (calculated)
8.575
GRAVY (calculated)
-0.394
Length
598 amino acids
Sequence
(BLAST)
(BLAST)
001: MEHHHKPGLR VRLRITAARR RAWLSACLRP PCRKPPRRDH SDSVHKVARR EIGGGHRRPP RPAAPSSSSF SCPEKFRNFQ LQVEWSAKTS RWGCLKLKDG
101: DAEVGGCDAM GMGVDGVGRE TSDDRGRRIV IFFTYVLSCH PVTRSLEGAA RKIEKRRKGK RLRCQEIRRC EPSDILYLHI SHMVKLAVQE EYDTYDDEVH
201: FLVKLPFLCT RTKIIEIVAA KDVIFALAQS GLCAAFNRTT NKRICYLNIS PDEVIRSLFY NKNNESLITV SVYESDRFSS LKCRTTPIEY IRRGQLKDGF
301: PLFETESLKY PGFVEFDDVN GKVLTFSAKG CTYKVFDLKN YNFLYSICDE NIQEIKISPG IMLVIYNYKK TNCHVPLTIL SIEDGTPLKT FNQLLHRNRK
401: VDFIEQFNEK LLVKQDKENL QIIDVRNSDL IEVNKTEFMT PSAFIFLYEN NLFLTFCNRT VAAWNFRGEL VTSFEDHELW HPNCNTNNIY ITAGHDLIIS
501: YCKVSKQRAD CVDSEAGEVL SMGSINMSDI FTGKCVAKIS PADPTLTIAP RRRGDDSRST IRSTVPEALE DITALFYDED RNEIYTGNSK GLVHVWSN
101: DAEVGGCDAM GMGVDGVGRE TSDDRGRRIV IFFTYVLSCH PVTRSLEGAA RKIEKRRKGK RLRCQEIRRC EPSDILYLHI SHMVKLAVQE EYDTYDDEVH
201: FLVKLPFLCT RTKIIEIVAA KDVIFALAQS GLCAAFNRTT NKRICYLNIS PDEVIRSLFY NKNNESLITV SVYESDRFSS LKCRTTPIEY IRRGQLKDGF
301: PLFETESLKY PGFVEFDDVN GKVLTFSAKG CTYKVFDLKN YNFLYSICDE NIQEIKISPG IMLVIYNYKK TNCHVPLTIL SIEDGTPLKT FNQLLHRNRK
401: VDFIEQFNEK LLVKQDKENL QIIDVRNSDL IEVNKTEFMT PSAFIFLYEN NLFLTFCNRT VAAWNFRGEL VTSFEDHELW HPNCNTNNIY ITAGHDLIIS
501: YCKVSKQRAD CVDSEAGEVL SMGSINMSDI FTGKCVAKIS PADPTLTIAP RRRGDDSRST IRSTVPEALE DITALFYDED RNEIYTGNSK GLVHVWSN
001: MMEGRRIIAN PRPCSGSRRV IAKKRSRPDG FVNSVKKLQR REISSRMDRA FSISTAQERF RNMRLVEQYD THDPKGYCLV SLPNLLKRSK VIEIVAARDI
101: VFALTLSGVC ASFSRETNKK VCFLNVSPDE VIRSLFYNKN NDSLITVSVY ASDNYSSLKC RSTRIEYILR GQADAGFPLF ESESLKWPGF VEFDDVNGKV
201: LTYSAQDSVY KVFDLKNYAL LYSISDKNVQ EIKISPGIML LIFKRAASHV PLKILSIEDG TLLKSFHHLL HRNKKVDFIE QFNEKLLVKQ ENENLQILDV
301: RNAELIEVSR TDFMTPSAFI FLYENQLFLT FRNRNVSVWN FRGELVTSFE DHLLWHPDCN TNNIYITSDQ DLIISYCKAD TEDQWIEGNA GSINISNILT
401: GKCLAKIKAN NGPPKEEDCS SSDLGNSSRR RSAVAEALED ITALFYDEER NEIYTGNRHG LLHVWSN
101: VFALTLSGVC ASFSRETNKK VCFLNVSPDE VIRSLFYNKN NDSLITVSVY ASDNYSSLKC RSTRIEYILR GQADAGFPLF ESESLKWPGF VEFDDVNGKV
201: LTYSAQDSVY KVFDLKNYAL LYSISDKNVQ EIKISPGIML LIFKRAASHV PLKILSIEDG TLLKSFHHLL HRNKKVDFIE QFNEKLLVKQ ENENLQILDV
301: RNAELIEVSR TDFMTPSAFI FLYENQLFLT FRNRNVSVWN FRGELVTSFE DHLLWHPDCN TNNIYITSDQ DLIISYCKAD TEDQWIEGNA GSINISNILT
401: GKCLAKIKAN NGPPKEEDCS SSDLGNSSRR RSAVAEALED ITALFYDEER NEIYTGNRHG LLHVWSN
Arabidopsis Description
Transducin/WD40 repeat-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84J57]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.