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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • mitochondrion 4
  • cytosol 2
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d023762_P001 Maize mitochondrion 82.45 86.54
TraesCS5D01G116900.2 Wheat mitochondrion, nucleus 78.3 82.37
TraesCS5A01G107600.1 Wheat mitochondrion 78.11 82.16
TraesCS5B01G109800.2 Wheat nucleus 78.11 82.16
HORVU5Hr1G035370.20 Barley cytosol 68.84 81.73
Os12t0498300-01 Rice mitochondrion 77.91 80.94
GSMUA_AchrUn_... Banana nucleus 72.19 76.89
GSMUA_Achr1P21860_001 Banana cytosol 71.6 76.26
GSMUA_Achr5P05140_001 Banana nucleus 69.82 74.21
Zm00001d038513_P002 Maize plastid 62.13 68.78
Zm00001d010625_P003 Maize plastid 63.31 65.91
GSMUA_Achr3P05870_001 Banana cytosol 60.75 56.41
Zm00001d018291_P002 Maize cytosol, mitochondrion, nucleus, plastid 63.31 53.68
Protein Annotations
EnsemblPlants:Zm00001d041759_P002EnsemblPlants:Zm00001d041759_T002EnsemblPlantsGene:Zm00001d041759EntrezGene:100191710PANTHER:PTHR31789PANTHER:PTHR31789:SF2
ProteinID:ONM33616.1SEG:segSUPFAM:SSF69322UniParc:UPI0004DE849FUniProt:A0A1D6MY15MapMan:35.2
Description
Transducin/WD40 repeat-like superfamily protein
Coordinates
chr3:+:136193639..136204222
Molecular Weight (calculated)
57966.3 Da
IEP (calculated)
9.388
GRAVY (calculated)
-0.368
Length
507 amino acids
Sequence
(BLAST)
001: MDGPKRHLRV RLRVTARRRG AYGDGAGGAL GPRRRKCRME TPVLNSAAKL QRREIGGRQL AARGGGPAAA VPERFRNMQL QEEFDTYDDN ANLFVKLQFL
101: KRRSKINEIV AAKDIIFALA NSGLCAAFNR VTNKRIGFLN LSPDEVIRSL FYNKNNDSLI TVSVYASDNF STLKCRTTPV EYIRRNQLDA GFPLFESESL
201: KWPGFVEFDD VNGKVLTYSA QDGIYKVFDL KNYYFLYSIP DENVQEIKIS PGIMLLIYDR TPSYVPLKIL SIEDGKQLKF FKHLLHRNKK IDFIEQFNEK
301: LLVKQEDENF QILDVRSSEL IEVNVSKFMT PSAFIFLYEN NLFLTFRNRT VAVWNFRGDL VTSFEDHLLW HHDCSTNNIY ITSDQDLIIS YCKSEAVAED
401: GTAMARMTEW LTLRSSRREG VRLGRQVVPV GSINMSEIMT GKCIAKITAN DPALSAPPRR NGRSKRRSSV WSTVPEALED VTALFYDEDR NEIYTGNSHG
501: LVHVWSN
Best Arabidopsis Sequence Match ( AT2G38630.1 )
(BLAST)
001: MMEGRRIIAN PRPCSGSRRV IAKKRSRPDG FVNSVKKLQR REISSRMDRA FSISTAQERF RNMRLVEQYD THDPKGYCLV SLPNLLKRSK VIEIVAARDI
101: VFALTLSGVC ASFSRETNKK VCFLNVSPDE VIRSLFYNKN NDSLITVSVY ASDNYSSLKC RSTRIEYILR GQADAGFPLF ESESLKWPGF VEFDDVNGKV
201: LTYSAQDSVY KVFDLKNYAL LYSISDKNVQ EIKISPGIML LIFKRAASHV PLKILSIEDG TLLKSFHHLL HRNKKVDFIE QFNEKLLVKQ ENENLQILDV
301: RNAELIEVSR TDFMTPSAFI FLYENQLFLT FRNRNVSVWN FRGELVTSFE DHLLWHPDCN TNNIYITSDQ DLIISYCKAD TEDQWIEGNA GSINISNILT
401: GKCLAKIKAN NGPPKEEDCS SSDLGNSSRR RSAVAEALED ITALFYDEER NEIYTGNRHG LLHVWSN
Arabidopsis Description
Transducin/WD40 repeat-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84J57]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.