Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 2
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d023762_P001 | Maize | mitochondrion | 82.45 | 86.54 |
TraesCS5D01G116900.2 | Wheat | mitochondrion, nucleus | 78.3 | 82.37 |
TraesCS5A01G107600.1 | Wheat | mitochondrion | 78.11 | 82.16 |
TraesCS5B01G109800.2 | Wheat | nucleus | 78.11 | 82.16 |
HORVU5Hr1G035370.20 | Barley | cytosol | 68.84 | 81.73 |
Os12t0498300-01 | Rice | mitochondrion | 77.91 | 80.94 |
GSMUA_AchrUn_... | Banana | nucleus | 72.19 | 76.89 |
GSMUA_Achr1P21860_001 | Banana | cytosol | 71.6 | 76.26 |
GSMUA_Achr5P05140_001 | Banana | nucleus | 69.82 | 74.21 |
Zm00001d038513_P002 | Maize | plastid | 62.13 | 68.78 |
Zm00001d010625_P003 | Maize | plastid | 63.31 | 65.91 |
GSMUA_Achr3P05870_001 | Banana | cytosol | 60.75 | 56.41 |
Zm00001d018291_P002 | Maize | cytosol, mitochondrion, nucleus, plastid | 63.31 | 53.68 |
Protein Annotations
EnsemblPlants:Zm00001d041759_P002 | EnsemblPlants:Zm00001d041759_T002 | EnsemblPlantsGene:Zm00001d041759 | EntrezGene:100191710 | PANTHER:PTHR31789 | PANTHER:PTHR31789:SF2 |
ProteinID:ONM33616.1 | SEG:seg | SUPFAM:SSF69322 | UniParc:UPI0004DE849F | UniProt:A0A1D6MY15 | MapMan:35.2 |
Description
Transducin/WD40 repeat-like superfamily protein
Coordinates
chr3:+:136193639..136204222
Molecular Weight (calculated)
57966.3 Da
IEP (calculated)
9.388
GRAVY (calculated)
-0.368
Length
507 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGPKRHLRV RLRVTARRRG AYGDGAGGAL GPRRRKCRME TPVLNSAAKL QRREIGGRQL AARGGGPAAA VPERFRNMQL QEEFDTYDDN ANLFVKLQFL
101: KRRSKINEIV AAKDIIFALA NSGLCAAFNR VTNKRIGFLN LSPDEVIRSL FYNKNNDSLI TVSVYASDNF STLKCRTTPV EYIRRNQLDA GFPLFESESL
201: KWPGFVEFDD VNGKVLTYSA QDGIYKVFDL KNYYFLYSIP DENVQEIKIS PGIMLLIYDR TPSYVPLKIL SIEDGKQLKF FKHLLHRNKK IDFIEQFNEK
301: LLVKQEDENF QILDVRSSEL IEVNVSKFMT PSAFIFLYEN NLFLTFRNRT VAVWNFRGDL VTSFEDHLLW HHDCSTNNIY ITSDQDLIIS YCKSEAVAED
401: GTAMARMTEW LTLRSSRREG VRLGRQVVPV GSINMSEIMT GKCIAKITAN DPALSAPPRR NGRSKRRSSV WSTVPEALED VTALFYDEDR NEIYTGNSHG
501: LVHVWSN
101: KRRSKINEIV AAKDIIFALA NSGLCAAFNR VTNKRIGFLN LSPDEVIRSL FYNKNNDSLI TVSVYASDNF STLKCRTTPV EYIRRNQLDA GFPLFESESL
201: KWPGFVEFDD VNGKVLTYSA QDGIYKVFDL KNYYFLYSIP DENVQEIKIS PGIMLLIYDR TPSYVPLKIL SIEDGKQLKF FKHLLHRNKK IDFIEQFNEK
301: LLVKQEDENF QILDVRSSEL IEVNVSKFMT PSAFIFLYEN NLFLTFRNRT VAVWNFRGDL VTSFEDHLLW HHDCSTNNIY ITSDQDLIIS YCKSEAVAED
401: GTAMARMTEW LTLRSSRREG VRLGRQVVPV GSINMSEIMT GKCIAKITAN DPALSAPPRR NGRSKRRSSV WSTVPEALED VTALFYDEDR NEIYTGNSHG
501: LVHVWSN
001: MMEGRRIIAN PRPCSGSRRV IAKKRSRPDG FVNSVKKLQR REISSRMDRA FSISTAQERF RNMRLVEQYD THDPKGYCLV SLPNLLKRSK VIEIVAARDI
101: VFALTLSGVC ASFSRETNKK VCFLNVSPDE VIRSLFYNKN NDSLITVSVY ASDNYSSLKC RSTRIEYILR GQADAGFPLF ESESLKWPGF VEFDDVNGKV
201: LTYSAQDSVY KVFDLKNYAL LYSISDKNVQ EIKISPGIML LIFKRAASHV PLKILSIEDG TLLKSFHHLL HRNKKVDFIE QFNEKLLVKQ ENENLQILDV
301: RNAELIEVSR TDFMTPSAFI FLYENQLFLT FRNRNVSVWN FRGELVTSFE DHLLWHPDCN TNNIYITSDQ DLIISYCKAD TEDQWIEGNA GSINISNILT
401: GKCLAKIKAN NGPPKEEDCS SSDLGNSSRR RSAVAEALED ITALFYDEER NEIYTGNRHG LLHVWSN
101: VFALTLSGVC ASFSRETNKK VCFLNVSPDE VIRSLFYNKN NDSLITVSVY ASDNYSSLKC RSTRIEYILR GQADAGFPLF ESESLKWPGF VEFDDVNGKV
201: LTYSAQDSVY KVFDLKNYAL LYSISDKNVQ EIKISPGIML LIFKRAASHV PLKILSIEDG TLLKSFHHLL HRNKKVDFIE QFNEKLLVKQ ENENLQILDV
301: RNAELIEVSR TDFMTPSAFI FLYENQLFLT FRNRNVSVWN FRGELVTSFE DHLLWHPDCN TNNIYITSDQ DLIISYCKAD TEDQWIEGNA GSINISNILT
401: GKCLAKIKAN NGPPKEEDCS SSDLGNSSRR RSAVAEALED ITALFYDEER NEIYTGNRHG LLHVWSN
Arabidopsis Description
Transducin/WD40 repeat-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84J57]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.