Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- plastid 2
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G116900.2 | Wheat | mitochondrion, nucleus | 85.86 | 86.93 |
| TraesCS5B01G109800.2 | Wheat | nucleus | 85.25 | 86.31 |
| TraesCS5A01G107600.1 | Wheat | mitochondrion | 85.04 | 86.1 |
| EES16005 | Sorghum | mitochondrion, nucleus | 85.04 | 85.92 |
| HORVU5Hr1G035370.20 | Barley | cytosol | 74.39 | 85.01 |
| Zm00001d023762_P001 | Maize | mitochondrion | 83.4 | 84.27 |
| GSMUA_Achr5P05140_001 | Banana | nucleus | 77.87 | 79.66 |
| Zm00001d041759_P002 | Maize | cytosol, mitochondrion | 80.94 | 77.91 |
| GSMUA_Achr1P21860_001 | Banana | cytosol | 75.2 | 77.1 |
| GSMUA_AchrUn_... | Banana | nucleus | 75.2 | 77.1 |
| Os05t0482600-01 | Rice | plastid | 66.6 | 71.43 |
| Os02t0781800-02 | Rice | cytosol | 37.09 | 70.98 |
| Os01t0817800-01 | Rice | plastid | 63.52 | 68.28 |
| OQU79156 | Sorghum | cytosol | 22.13 | 65.45 |
| GSMUA_Achr3P05870_001 | Banana | cytosol | 66.19 | 59.16 |
| Os02t0159400-01 | Rice | nucleus | 7.99 | 13.0 |
Protein Annotations
| EnsemblPlants:Os12t0498300-01 | EnsemblPlantsGene:Os12g0498300 | EntrezGene:9266982 | Gene3D:2.130.10.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR015943 | InterPro:WD40/YVTN_repeat-like_dom_sf | PANTHER:PTHR31789 | PANTHER:PTHR31789:SF2 | ProteinID:ABA98599.1 |
| ProteinID:BAT17233.1 | RefSeq:XP_015620744.1 | SEG:seg | SUPFAM:SSF69322 | UniParc:UPI000068106A | UniProt:Q2QQD3 |
| MapMan:35.2 | : | : | : | : | : |
Description
WD40 repeat-like domain containing protein. (Os12t0498300-01)
Coordinates
chr12:+:18908884..18912892
Molecular Weight (calculated)
54900.5 Da
IEP (calculated)
8.136
GRAVY (calculated)
-0.306
Length
488 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGPKRSQLR VRLRVTARRR GGDGGADGGG SGGGGGGAGG RKRLLDAPAF NSAAKLQRRE IGGRQLAARG GGAASAVPER FRNMHLQEEF DTYDHNAHLF
101: VKLQFLKKRS KIIEIVAAKD IIFALAHSGL CAAFSRVTNK RISFLNLSPD EVIRSLFYNK NNDSLITVSV YASDHFSTLK CRTTPIEYIR RNQLDAGFPL
201: FETESLKWPG FVEFDDVNGK VLTYSAQDGI YKVFDLKNYS FLYSIPDTNV QEIKISPGIM LLIYERTPCH VPLKILSIED GRPLKSFTHL LHRNKKIDFI
301: EQFNEKLLVK QEDENLQILD VRSSELIEVS VTKFMTPSAF IFLYENNLFL TFRNRTVAVW NFRGELVTSF EDHLLWHQDC STNNIYITSD QDLIISYCKS
401: EAGVDDGTVP PIGSINMSDI MTGKCIAKIA ANDPTLRIGP RKNGNSERSS IWSTIPEALE DVTALFYDED RNEIYTGNRH GLVHVWSN
101: VKLQFLKKRS KIIEIVAAKD IIFALAHSGL CAAFSRVTNK RISFLNLSPD EVIRSLFYNK NNDSLITVSV YASDHFSTLK CRTTPIEYIR RNQLDAGFPL
201: FETESLKWPG FVEFDDVNGK VLTYSAQDGI YKVFDLKNYS FLYSIPDTNV QEIKISPGIM LLIYERTPCH VPLKILSIED GRPLKSFTHL LHRNKKIDFI
301: EQFNEKLLVK QEDENLQILD VRSSELIEVS VTKFMTPSAF IFLYENNLFL TFRNRTVAVW NFRGELVTSF EDHLLWHQDC STNNIYITSD QDLIISYCKS
401: EAGVDDGTVP PIGSINMSDI MTGKCIAKIA ANDPTLRIGP RKNGNSERSS IWSTIPEALE DVTALFYDED RNEIYTGNRH GLVHVWSN
001: MEGRRITASP RPCSGRRIVA KKRSRPDGFV NSVKKLQRRE ISSRKDRAFS ISTAQERFRN MRLVEQYDTH DPKGHCLVAL PFLMKRTKVI EIVAARDIVF
101: ALAHSGVCAA FSRESNKRIC FLNVSPDEVI RSLFYNKNND SLITVSVYAS DNFSSLKCRS TRIEYILRGQ PDAGFALFES ESLKWPGFVE FDDVNGKVLT
201: YSAQDSVYKV FDLKNYTMLY SISDKNVQEI KISPGIMLLI FKRAASHVPL KILSIEDGTV LKSFNHLLHR NKKVDFIEQF NEKLLVKQEN ENLQILDVRN
301: AELMEVSRAE FMTPSAFIFL YENQLFLTFR NRNVSVWNFR GELVTSFEDH LLWHPDCNTN NIYITSDQDL IISYCKADTE DQWIEGNAGS INISNILTGK
401: CLAKITPSSG PPKDDESSSS NCMGKNSKQR RNAVAEALED ITALFYDEER NEIYTGNRHG LVHVWSN
101: ALAHSGVCAA FSRESNKRIC FLNVSPDEVI RSLFYNKNND SLITVSVYAS DNFSSLKCRS TRIEYILRGQ PDAGFALFES ESLKWPGFVE FDDVNGKVLT
201: YSAQDSVYKV FDLKNYTMLY SISDKNVQEI KISPGIMLLI FKRAASHVPL KILSIEDGTV LKSFNHLLHR NKKVDFIEQF NEKLLVKQEN ENLQILDVRN
301: AELMEVSRAE FMTPSAFIFL YENQLFLTFR NRNVSVWNFR GELVTSFEDH LLWHPDCNTN NIYITSDQDL IISYCKADTE DQWIEGNAGS INISNILTGK
401: CLAKITPSSG PPKDDESSSS NCMGKNSKQR RNAVAEALED ITALFYDEER NEIYTGNRHG LVHVWSN
Arabidopsis Description
AT3g54190/F24B22_150 [Source:UniProtKB/TrEMBL;Acc:Q9C5G8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.