Factsheet for GSMUA_Achr1P21860_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	nucleus	93.49	93.49
GSMUA_Achr5P05140_001	Banana	nucleus	82.77	82.6
HORVU5Hr1G035370.20	Barley	cytosol	68.49	76.35
Os12t0498300-01	Rice	mitochondrion	77.1	75.2
EES16005	Sorghum	mitochondrion, nucleus	76.26	75.16
TraesCS5D01G116900.2	Wheat	mitochondrion, nucleus	75.84	74.9
TraesCS5B01G109800.2	Wheat	nucleus	75.42	74.48
TraesCS5A01G107600.1	Wheat	mitochondrion	75.21	74.27
Zm00001d023762_P001	Maize	mitochondrion	75.21	74.12
Zm00001d041759_P002	Maize	cytosol, mitochondrion	76.26	71.6
Os02t0781800-02	Rice	cytosol	36.97	69.02
EES07638	Sorghum	mitochondrion	68.7	66.87
HORVU6Hr1G082150.2	Barley	mitochondrion	67.02	65.64
TraesCS6B01G371900.1	Wheat	cytosol, mitochondrion, nucleus, plastid	66.81	65.16
GSMUA_Achr3P05870_001	Banana	cytosol	70.38	61.36
OQU79156	Sorghum	cytosol	21.01	60.61
Zm00001d018291_P002	Maize	cytosol, mitochondrion, nucleus, plastid	67.65	53.85

Protein Annotations

EnsemblPlants:GSMUA_Achr1P21860_001	EnsemblPlants:GSMUA_Achr1T21860_001	EnsemblPlantsGene:GSMUA_Achr1G21860_001	Gene3D:2.130.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015943	InterPro:WD40/YVTN_repeat-like_dom_sf	PANTHER:PTHR31789	PANTHER:PTHR31789:SF2	SUPFAM:SSF69322
UniParc:UPI0002968AA5	UniProt:M0S1Z4	MapMan:35.2	:	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G21860_001]

Coordinates

chr1:+:16408261..16412518

Molecular Weight (calculated)

54620.1 Da

IEP (calculated)

8.387

GRAVY (calculated)

-0.360

Length

476 amino acids

Sequence
(BLAST)

001: MENHKKTPVR VRFRVTAKKR GCDTGASTDG KRRRRLDCVN SVRKLQRREI GGFPCMARGV ASDATEKFRN IQLQEEFDAY DHNVHWFVKL QFLKKRSKII
101: EIVSAKDIIF ALAYSGLCAA FSRSTNERIC FLNISPDEVI RSLFYNKNND SLITVSVYAS DHFSSLKCRT TPIEFIKRNQ LDAGFPLFES ESLKWPGFVE
201: FDDVNGKVLT YSAQDGIYKV FDLKNYKFLY AISDKNMQEI KISPGIMLLI FNRTPSYVPL KILSIEDGTV LKSFNHLLHR NKKVDFIEQF NEKLLVKQEN
301: ENLQILDVRN SELTEVSRTE FMTPSAFIFL YENHLFLTFR NRTVAVWNFR GELVTSFEDH LLWHPDCNTN NIYITSDQDL IISYCKAEEG CGDEGDVSAV
401: GSINMSNILT GKCIAKISAS DPALQTSPQR RGKTGRSSIR STVREALEDV TALFYDEDRN EIYTGNKQGL IHVWSN

Best Arabidopsis Sequence Match ( AT3G54190.1 )
(BLAST)

001: MEGRRITASP RPCSGRRIVA KKRSRPDGFV NSVKKLQRRE ISSRKDRAFS ISTAQERFRN MRLVEQYDTH DPKGHCLVAL PFLMKRTKVI EIVAARDIVF
101: ALAHSGVCAA FSRESNKRIC FLNVSPDEVI RSLFYNKNND SLITVSVYAS DNFSSLKCRS TRIEYILRGQ PDAGFALFES ESLKWPGFVE FDDVNGKVLT
201: YSAQDSVYKV FDLKNYTMLY SISDKNVQEI KISPGIMLLI FKRAASHVPL KILSIEDGTV LKSFNHLLHR NKKVDFIEQF NEKLLVKQEN ENLQILDVRN
301: AELMEVSRAE FMTPSAFIFL YENQLFLTFR NRNVSVWNFR GELVTSFEDH LLWHPDCNTN NIYITSDQDL IISYCKADTE DQWIEGNAGS INISNILTGK
401: CLAKITPSSG PPKDDESSSS NCMGKNSKQR RNAVAEALED ITALFYDEER NEIYTGNRHG LVHVWSN

Arabidopsis Description

AT3g54190/F24B22_150 [Source:UniProtKB/TrEMBL;Acc:Q9C5G8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.