Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER93221 | Sorghum | mitochondrion | 77.53 | 85.71 |
| Zm00001d013128_P004 | Maize | cytosol, plastid | 63.48 | 59.79 |
| Zm00001d007270_P001 | Maize | mitochondrion | 33.15 | 41.55 |
| Zm00001d004311_P001 | Maize | extracellular | 17.42 | 38.27 |
| Zm00001d041778_P006 | Maize | cytosol, mitochondrion | 32.02 | 36.54 |
| Zm00001d034337_P005 | Maize | cytosol | 62.36 | 35.35 |
| Zm00001d010247_P001 | Maize | extracellular | 19.66 | 32.41 |
| Zm00001d050256_P001 | Maize | cytosol, mitochondrion | 25.28 | 31.47 |
| Zm00001d047992_P006 | Maize | cytosol, mitochondrion | 26.97 | 27.27 |
| Zm00001d008712_P001 | Maize | extracellular | 20.22 | 16.51 |
| Zm00001d042538_P001 | Maize | plastid | 21.91 | 13.09 |
| Zm00001d041448_P001 | Maize | plastid | 20.79 | 13.03 |
Protein Annotations
| MapMan:22.1.2.4 | Gene3D:3.30.450.60 | UniProt:A0A1D6L964 | InterPro:AP_complex_ssu | InterPro:AP_mu_sigma_su | InterPro:Clathrin_sm-chain_CS |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0008565 | GO:GO:0015031 | GO:GO:0016020 |
| GO:GO:0016192 | GO:GO:0030117 | InterPro:Longin-like_dom_sf | ProteinID:ONM10731.1 | PFAM:PF01217 | ScanProsite:PS00989 |
| PANTHER:PTHR11753 | PANTHER:PTHR11753:SF32 | SUPFAM:SSF64356 | UniParc:UPI0008459D84 | EnsemblPlantsGene:Zm00001d034595 | EnsemblPlants:Zm00001d034595_P001 |
| EnsemblPlants:Zm00001d034595_T001 | : | : | : | : | : |
Description
AP-1 complex subunit sigma-2
Coordinates
chr1:+:297417890..297419492
Molecular Weight (calculated)
20309.9 Da
IEP (calculated)
6.142
GRAVY (calculated)
0.202
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MVHSIPTEAE IQGTPNTSAV LPLFWLGPTL VCMQLHPMVS HLLFVHKIIK EISTLVLTRG PKLCNFVDWQ GYRVVYKRYA SLYFCMCIDP ADNELETLQI
101: IHHYVEILDR YFGNVCELDL IFNFHKAYFI LDEILIAGEL QESNKKSVLR LVTTQDALVE AAKEEAGSLR NIIAQATK
101: IHHYVEILDR YFGNVCELDL IFNFHKAYFI LDEILIAGEL QESNKKSVLR LVTTQDALVE AAKEEAGSLR NIIAQATK
001: MIHFVLLVSR QGKVRLTKWY SPYTQKERSK VIRELSGVIL NRGPKLCNFI EWRGYKVVYK RYASLYFCMC IDEADNELEV LEIIHHYVEI LDRYFGSVCE
101: LDLIFNFHKA YYILDELLIA GELQESSKKT VARIISAQDQ LVEVAKEEAS SISNIIAQAT K
101: LDLIFNFHKA YYILDELLIA GELQESSKKT VARIISAQDQ LVEVAKEEAS SISNIIAQAT K
Arabidopsis Description
AAP19-1AP-1 complex subunit sigma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LEZ8]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.