Factsheet for Zm00001d008712_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	peroxisome, secretory
iPSORT:	secretory
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010247_P001	Maize	extracellular	46.79	94.44
Zm00001d004311_P001	Maize	extracellular	30.73	82.72
Zm00001d041448_P001	Maize	plastid	99.54	76.41
Zm00001d042538_P001	Maize	plastid	88.07	64.43
TraesCS4B01G234400.1	Wheat	cytosol	31.65	41.57
TraesCS4A01G078400.1	Wheat	cytosol	31.65	41.57
GSMUA_Achr8P26380_001	Banana	cytosol, mitochondrion	31.19	40.96
TraesCS4D01G235600.1	Wheat	cytosol	31.19	40.96
Os03t0228400-01	Rice	cytosol, mitochondrion	30.28	39.76
Zm00001d047992_P006	Maize	cytosol, mitochondrion	31.65	39.2
Os01t0353600-00	Rice	mitochondrion	28.9	37.95
VIT_04s0023g01770.t01	Wine grape	cytosol, mitochondrion	27.52	36.36
PGSC0003DMT400009269	Potato	cytosol	25.23	33.74
KRH69924	Soybean	cytosol, mitochondrion	25.69	33.73
KRH08275	Soybean	cytosol, mitochondrion	25.69	33.73
Solyc02g085240.2.1	Tomato	cytosol	25.69	33.53
AT3G50860.1	Thale cress	cytosol	24.77	32.53
Bra012884.1-P	Field mustard	cytosol	24.77	32.34
GSMUA_AchrUn_...	Banana	cytosol	26.61	32.22
CDX90681	Canola	cytosol	24.31	31.74
Solyc01g109640.2.1	Tomato	cytosol	22.94	30.3
CDY28984	Canola	cytosol	25.23	26.07
Zm00001d050256_P001	Maize	cytosol, mitochondrion	16.97	25.87
Bra036855.1-P	Field mustard	cytosol	10.55	25.56
Zm00001d007270_P001	Maize	mitochondrion	16.51	25.35
CDX73778	Canola	cytosol, endoplasmic reticulum, nucleus	15.14	23.24
Zm00001d041778_P006	Maize	cytosol, mitochondrion	16.05	22.44
PGSC0003DMT400001875	Potato	cytosol	16.51	21.43
Zm00001d013128_P004	Maize	cytosol, plastid	17.89	20.63
Zm00001d034595_P001	Maize	cytosol	16.51	20.22
Zm00001d034337_P005	Maize	cytosol	17.43	12.1

Protein Annotations

Gene3D:1.20.200.10	MapMan:50.4.3	UniProt:A0A1D6FET9	InterPro:AP_mu_sigma_su	ProteinID:AQK90462.1	InterPro:Aromatic_Lyase
InterPro:Clathrin_sm-chain_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0015031	GO:GO:0016020
GO:GO:0016192	GO:GO:0016829	GO:GO:0030117	InterPro:L-Aspartase-like	InterPro:Longin-like_dom_sf	PFAM:PF00221
PFAM:PF01217	ScanProsite:PS00989	PANTHER:PTHR10362	PANTHER:PTHR10362:SF31	SUPFAM:SSF48557	SUPFAM:SSF64356
SignalP:SignalP-noTM	UniParc:UPI0008428727	EnsemblPlantsGene:Zm00001d008712	EnsemblPlants:Zm00001d008712_P001	EnsemblPlants:Zm00001d008712_T001	:

Description

Phenylalanine ammonia-lyase 1

Coordinates

chr8:+:17571452..17574641

Molecular Weight (calculated)

24439.1 Da

IEP (calculated)

6.501

GRAVY (calculated)

0.342

Length

218 amino acids

Sequence
(BLAST)

001: MVNGTAVGSG LASTVLFEAN ILAILAEVLS AVFCEVMNGK PEYIDHLTHK LKHHPGHIEA AAIMEHILEG NSFMKLAKKL GELDPLMKPK QDQSKTNLQS
101: LMSAAIPNVI GWIAISFAKG TKMVYKHLAT LYFVFVFDSS ENELAMLDLV QVFVETLDRC FKNVCELDII FNFNKVPYVH MILPFLSFYN RIVCLSRMQG
201: FYPAENSIYD SSIACCMF

Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)

001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC

Arabidopsis Description

PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.