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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • plastid 1
  • cytosol 3
  • plasma membrane 1
  • nucleus 2
  • mitochondrion 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH08275 Soybean cytosol, mitochondrion 95.18 95.18
VIT_04s0023g01770.t01 Wine grape cytosol, mitochondrion 80.12 80.61
AT3G50860.1 Thale cress cytosol 79.52 79.52
Bra012884.1-P Field mustard cytosol 78.92 78.44
CDX90681 Canola cytosol 78.31 77.84
GSMUA_Achr8P26380_001 Banana cytosol, mitochondrion 73.49 73.49
Solyc02g085240.2.1 Tomato cytosol 71.69 71.26
PGSC0003DMT400009269 Potato cytosol 66.87 68.1
Bra036855.1-P Field mustard cytosol 36.75 67.78
TraesCS4B01G234400.1 Wheat cytosol 65.66 65.66
TraesCS4A01G078400.1 Wheat cytosol 65.66 65.66
EER92601 Sorghum mitochondrion 65.06 65.06
TraesCS4D01G235600.1 Wheat cytosol 65.06 65.06
Os03t0228400-01 Rice cytosol, mitochondrion 64.46 64.46
Zm00001d004311_P001 Maize extracellular 30.12 61.73
CDY28984 Canola cytosol 78.31 61.61
Os01t0353600-00 Rice mitochondrion 60.24 60.24
Zm00001d047992_P006 Maize cytosol, mitochondrion 63.25 59.66
CDX73778 Canola cytosol, endoplasmic reticulum, nucleus 43.98 51.41
Zm00001d010247_P001 Maize extracellular 31.33 48.15
OQU84502 Sorghum mitochondrion 61.45 48.11
KRH17427 Soybean mitochondrion 34.94 40.85
KRH05944 Soybean mitochondrion 34.94 40.85
GSMUA_AchrUn_... Banana cytosol 41.57 38.33
KRG90038 Soybean cytosol, mitochondrion 36.14 37.27
KRH73467 Soybean cytosol, mitochondrion 37.95 37.06
KRH17634 Soybean endoplasmic reticulum 35.54 36.65
KRH74193 Soybean mitochondrion 31.33 36.36
KRH49010 Soybean mitochondrion 31.33 36.36
KRH60179 Soybean cytosol 17.47 32.22
Zm00001d008712_P001 Maize extracellular 33.73 25.69
Zm00001d041448_P001 Maize plastid 36.14 21.13
Zm00001d042538_P001 Maize plastid 36.14 20.13
Protein Annotations
EntrezGene:100306517MapMan:22.1.5.4Gene3D:3.30.450.60EMBL:ACUP02000735InterPro:APS3InterPro:AP_complex_ssu
InterPro:AP_mu_sigma_suEMBL:BT090652UniProt:C6SZQ0InterPro:Clathrin_sm-chain_CSncoils:CoilEnsemblPlantsGene:GLYMA_02G056900
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0006810GO:GO:0006886GO:GO:0008150GO:GO:0008565GO:GO:0015031GO:GO:0016020
GO:GO:0016192GO:GO:0030117GO:GO:0030123EnsemblPlants:KRH69924ProteinID:KRH69924ProteinID:KRH69924.1
InterPro:Longin-like_dom_sfPFAM:PF01217PIRSF:PIRSF015588ScanProsite:PS00989PANTHER:PTHR11753PANTHER:PTHR11753:SF2
SUPFAM:SSF64356UniParc:UPI0001B15170::::
Description
hypothetical protein
Coordinates
chr2:-:5108816..5113846
Molecular Weight (calculated)
18944.8 Da
IEP (calculated)
5.273
GRAVY (calculated)
0.057
Length
166 amino acids
Sequence
(BLAST)
001: MIKAVLVLNT QGKPRLAKFY EFQSVEKQHD AIRNVFSVLC SRPEHVSNFV DAESFFGPDS RLVYKHFATL YFVFIFDSSE NELAMLDLIQ VLVETLDKCF
101: RNVCELDIVF NYSKMHTILD EIILGGQVLE TSSNEVMKAI EEISRLESAS KAINLVPKSV SGWRSQ
Best Arabidopsis Sequence Match ( AT3G50860.1 )
(BLAST)
001: MIKAVMMMNT QGKPRLAKFY DYLPVEKQQE LIRGVFSVLC SRPENVSNFL EIESLFGPDS RLVYKHYATL YFVLVFDGSE NELAMLDLIQ VLVETLDKCF
101: SNVCELDIVF NYSKMHAVLD EIVFGGQVLE TSSAEVMKAV EEISKLEAAS NSISLVPKSV SGWRGR
Arabidopsis Description
AP-3 complex subunit sigma [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ37]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.