CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
mitochondrion 4
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH17634	Soybean	endoplasmic reticulum	77.65	81.99
KRG90038	Soybean	cytosol, mitochondrion	77.06	81.37
Os03t0783700-00	Rice	plasma membrane	75.88	80.12
TraesCS5D01G430000.1	Wheat	cytosol, mitochondrion	74.12	78.26
TraesCS5B01G423600.1	Wheat	cytosol, mitochondrion	74.12	78.26
PGSC0003DMT400015459	Potato	cytosol	59.41	70.63
HORVU5Hr1G102770.1	Barley	extracellular, golgi	73.53	69.44
HORVU5Hr1G102930.4	Barley	extracellular, golgi	73.53	69.44
Zm00001d013128_P004	Maize	cytosol, plastid	74.71	67.2
GSMUA_Achr8P15550_001	Banana	cytosol, mitochondrion	72.35	62.76
GSMUA_Achr3P24130_001	Banana	cytosol, mitochondrion	75.88	61.43
KRH17427	Soybean	mitochondrion	44.71	53.52
KRH05944	Soybean	mitochondrion	44.12	52.82
KXG37427	Sorghum	cytosol, nucleus, plastid	75.88	48.13
GSMUA_Achr9P11170_001	Banana	extracellular	72.35	45.22
Zm00001d034337_P005	Maize	cytosol	76.47	41.4
KRH74193	Soybean	mitochondrion	34.71	41.26
KRH49010	Soybean	mitochondrion	34.71	41.26
KRH69924	Soybean	cytosol, mitochondrion	37.06	37.95
KRH08275	Soybean	cytosol, mitochondrion	35.88	36.75
KRH60179	Soybean	cytosol	18.24	34.44

Protein Annotations

EntrezGene:100810513	MapMan:22.1.2.4	Gene3D:3.30.450.60	UniProt:A0A0R0L8Y1	EMBL:ACUP02001278	InterPro:AP_complex_ssu
InterPro:AP_mu_sigma_su	InterPro:Clathrin_sm-chain_CS	ncoils:Coil	EnsemblPlantsGene:GLYMA_02G274700	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006886
GO:GO:0008150	GO:GO:0008565	GO:GO:0015031	GO:GO:0016020	GO:GO:0016192	GO:GO:0030117
EnsemblPlants:KRH73467	ProteinID:KRH73467	ProteinID:KRH73467.1	InterPro:Longin-like_dom_sf	PFAM:PF01217	PIRSF:PIRSF015588
ScanProsite:PS00989	PANTHER:PTHR11753	PANTHER:PTHR11753:SF32	SUPFAM:SSF64356	SignalP:SignalP-noTM	UniParc:UPI0003DECBD0

Description

hypothetical protein

Coordinates

chr2:+:45779378..45781473

Molecular Weight (calculated)

19878.2 Da

IEP (calculated)

8.601

GRAVY (calculated)

-0.040

Length

170 amino acids

Sequence
(BLAST)

001: MLHISFLRRW IHFVLLISRQ GKVRLAKWYS PYSQKERSKV IRELTGLIIS RAPKLCNFVE WRGFKVVYKR YASLYFCICN DHEDNELETL AIIHHYVETL
101: DRYFGSVCEL DLIFNFHKAY FILDEILLAG AMQETSKRTT LRLIGAQEDL VEAAKEEASS LSNIIAQATK

Best Arabidopsis Sequence Match ( AT4G35410.2 )
(BLAST)

001: MIHFVLLVSR QGKVRLTKWY SPYAQKERSK VIRELSGVIL NRGPKLCNFV EWRGYKVVYK RYASLYFCMC IDQEDNELEV LEIIHHYVEI LDRYFGSVCE
101: LDLIFNFHKA YYILDELLIA GELQESSKKT VARIISAQDQ LVEVAKEEAS SISNIIAQAT NR

Arabidopsis Description

AAP19-2AP-1 complex subunit sigma-2 [Source:UniProtKB/Swiss-Prot;Acc:O23685]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.