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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • plastid 3
  • cytosol 3
  • plasma membrane 1
  • golgi 1
  • mitochondrion 3
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G430000.1 Wheat cytosol, mitochondrion 70.95 92.55
TraesCS5B01G423600.1 Wheat cytosol, mitochondrion 70.95 92.55
Solyc11g005220.1.1 Tomato nucleus 70.95 92.55
Os03t0783700-00 Rice plasma membrane 70.95 92.55
PGSC0003DMT400015461 Potato cytosol, mitochondrion 70.48 91.93
KRH17634 Soybean endoplasmic reticulum 69.05 90.06
KRG90038 Soybean cytosol, mitochondrion 69.05 90.06
Bra002054.1-P Field mustard cytosol, mitochondrion 67.62 88.2
AT2G17380.1 Thale cress cytosol, mitochondrion 67.14 87.58
AT4G35410.2 Thale cress mitochondrion 67.14 87.04
VIT_01s0127g00810.t01 Wine grape golgi 71.9 84.83
VIT_16s0050g00660.t01 Wine grape golgi 70.95 84.18
HORVU5Hr1G102930.4 Barley extracellular, golgi 71.9 83.89
HORVU5Hr1G102770.1 Barley extracellular, golgi 71.9 83.89
CDY69066 Canola cytosol 68.1 80.79
Zm00001d013128_P004 Maize cytosol, plastid 70.0 77.78
PGSC0003DMT400015459 Potato cytosol 52.86 77.62
KRH73467 Soybean cytosol, mitochondrion 61.43 75.88
CDX69137 Canola extracellular 66.19 75.14
GSMUA_Achr8P15550_001 Banana cytosol, mitochondrion 69.05 73.98
CDX75500 Canola cytosol 67.14 69.46
Bra011613.1-P Field mustard cytosol 67.14 69.46
CDY50208 Canola extracellular, plasma membrane 70.0 68.37
KXG37427 Sorghum cytosol, nucleus, plastid 76.19 59.7
GSMUA_Achr9P11170_001 Banana extracellular 71.43 55.15
Zm00001d034337_P005 Maize cytosol 76.67 51.27
GSMUA_Achr8P19280_001 Banana cytosol 36.67 45.56
GSMUA_Achr4P10500_001 Banana mitochondrion 30.95 45.14
GSMUA_Achr8P26380_001 Banana cytosol, mitochondrion 27.62 34.94
GSMUA_AchrUn_... Banana cytosol 18.1 21.11
Protein Annotations
MapMan:22.1.2.4Gene3D:3.30.450.60InterPro:AP_complex_ssuInterPro:AP_mu_sigma_suInterPro:Clathrin_sm-chain_CSGO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006810
GO:GO:0006886GO:GO:0008150GO:GO:0008565GO:GO:0015031GO:GO:0016020GO:GO:0016192
GO:GO:0030117EnsemblPlantsGene:GSMUA_Achr3G24130_001EnsemblPlants:GSMUA_Achr3P24130_001EnsemblPlants:GSMUA_Achr3T24130_001InterPro:Longin-like_dom_sfUniProt:M0SHC9
PFAM:PF01217PIRSF:PIRSF015588ScanProsite:PS00989PANTHER:PTHR11753PANTHER:PTHR11753:SF32SUPFAM:SSF64356
UniParc:UPI0002956367SEG:seg::::
Description
AP-1 complex subunit sigma-1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G24130_001]
Coordinates
chr3:+:24766301..24774661
Molecular Weight (calculated)
24203.7 Da
IEP (calculated)
8.565
GRAVY (calculated)
0.017
Length
210 amino acids
Sequence
(BLAST)
001: MCWIALSNCA HFAFKKMGRL LATRGKVFPL RLLPSVLEAA QEEEGRGREM IHFVLLISRQ GKVRLTKWYS PYSQKERTKV IRELSGLILA RGPKLCNFVE
101: WRGYKVVYRR YASLYFCMCI DADDNELEIL EIIHHFVEIL DRYFGSVCEL DLIFNFHKAY YILDEILIAG ELQESSKKTV ARLIAAQDSL VEAAKEQASS
201: VSNMIAQVTK
Best Arabidopsis Sequence Match ( AT2G17380.1 )
(BLAST)
001: MIHFVLLVSR QGKVRLTKWY SPYTQKERSK VIRELSGVIL NRGPKLCNFI EWRGYKVVYK RYASLYFCMC IDEADNELEV LEIIHHYVEI LDRYFGSVCE
101: LDLIFNFHKA YYILDELLIA GELQESSKKT VARIISAQDQ LVEVAKEEAS SISNIIAQAT K
Arabidopsis Description
AAP19-1AP-1 complex subunit sigma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LEZ8]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.