Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- mitochondrion 4
- plasma membrane 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g005220.1.1 | Tomato | nucleus | 98.76 | 98.76 |
| Os03t0783700-00 | Rice | plasma membrane | 93.17 | 93.17 |
| TraesCS5D01G430000.1 | Wheat | cytosol, mitochondrion | 91.93 | 91.93 |
| TraesCS5B01G423600.1 | Wheat | cytosol, mitochondrion | 91.93 | 91.93 |
| VIT_16s0050g00660.t01 | Wine grape | golgi | 95.03 | 86.44 |
| VIT_01s0127g00810.t01 | Wine grape | golgi | 95.03 | 85.96 |
| HORVU5Hr1G102770.1 | Barley | extracellular, golgi | 91.3 | 81.67 |
| HORVU5Hr1G102930.4 | Barley | extracellular, golgi | 91.3 | 81.67 |
| PGSC0003DMT400015459 | Potato | cytosol | 72.05 | 81.12 |
| Zm00001d013128_P004 | Maize | cytosol, plastid | 90.68 | 77.25 |
| GSMUA_Achr3P24130_001 | Banana | cytosol, mitochondrion | 91.93 | 70.48 |
| GSMUA_Achr8P15550_001 | Banana | cytosol, mitochondrion | 85.71 | 70.41 |
| KXG37427 | Sorghum | cytosol, nucleus, plastid | 93.79 | 56.34 |
| PGSC0003DMT400025529 | Potato | mitochondrion | 46.58 | 52.82 |
| GSMUA_Achr9P11170_001 | Banana | extracellular | 87.58 | 51.84 |
| Zm00001d034337_P005 | Maize | cytosol | 94.41 | 48.41 |
| PGSC0003DMT400074468 | Potato | mitochondrion | 37.89 | 42.66 |
| PGSC0003DMT400009269 | Potato | cytosol | 32.92 | 32.52 |
| PGSC0003DMT400001875 | Potato | cytosol | 27.33 | 26.19 |
Protein Annotations
| EntrezGene:102603184 | MapMan:22.1.2.4 | Gene3D:3.30.450.60 | InterPro:AP_complex_ssu | InterPro:AP_mu_sigma_su | InterPro:Clathrin_sm-chain_CS |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0008565 | GO:GO:0015031 | GO:GO:0016020 |
| GO:GO:0016192 | GO:GO:0030117 | InterPro:Longin-like_dom_sf | UniProt:M1A626 | PFAM:PF01217 | EnsemblPlantsGene:PGSC0003DMG402006035 |
| PGSC:PGSC0003DMG402006035 | EnsemblPlants:PGSC0003DMT400015461 | PIRSF:PIRSF015588 | ScanProsite:PS00989 | PANTHER:PTHR11753 | PANTHER:PTHR11753:SF32 |
| SUPFAM:SSF64356 | UniParc:UPI0002947F4C | RefSeq:XP_006351110.1 | : | : | : |
Description
Clathrin coat assembly protein ap19 [Source:PGSC_GENE;Acc:PGSC0003DMG402006035]
Coordinates
chr11:-:8022315..8028894
Molecular Weight (calculated)
18720.8 Da
IEP (calculated)
7.446
GRAVY (calculated)
-0.024
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MIHFVLLISR QGKVRLTKWY SPYTQKERTK VIRELSGMIL SRGPKLCNFV EWRGYKVVYK RYASLYFCMC IDQEDNELEV LEIIHHFVEI LDRYFGSVCE
101: LDLIFNFHKA YYILDELVIA GELQESSKKT VARLIAAQDS LVEAAKEEAS SLSNIIAQAT K
101: LDLIFNFHKA YYILDELVIA GELQESSKKT VARLIAAQDS LVEAAKEEAS SLSNIIAQAT K
001: MIHFVLLVSR QGKVRLTKWY SPYAQKERSK VIRELSGVIL NRGPKLCNFV EWRGYKVVYK RYASLYFCMC IDQEDNELEV LEIIHHYVEI LDRYFGSVCE
101: LDLIFNFHKA YYILDELLIA GELQESSKKT VARIISAQDQ LVEVAKEEAS SISNIIAQAT NR
101: LDLIFNFHKA YYILDELLIA GELQESSKKT VARIISAQDQ LVEVAKEEAS SISNIIAQAT NR
Arabidopsis Description
AAP19-2AP-1 complex subunit sigma-2 [Source:UniProtKB/Swiss-Prot;Acc:O23685]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.