Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 5
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G17380.1 | Thale cress | cytosol, mitochondrion | 96.3 | 96.89 |
| Os03t0783700-00 | Rice | plasma membrane | 88.27 | 88.82 |
| KRH17634 | Soybean | endoplasmic reticulum | 88.27 | 88.82 |
| KRG90038 | Soybean | cytosol, mitochondrion | 88.27 | 88.82 |
| TraesCS5D01G430000.1 | Wheat | cytosol, mitochondrion | 87.04 | 87.58 |
| TraesCS5B01G423600.1 | Wheat | cytosol, mitochondrion | 87.04 | 87.58 |
| CDX69137 | Canola | extracellular | 92.59 | 81.08 |
| HORVU5Hr1G102770.1 | Barley | extracellular, golgi | 86.42 | 77.78 |
| HORVU5Hr1G102930.4 | Barley | extracellular, golgi | 86.42 | 77.78 |
| CDX75500 | Canola | cytosol | 93.21 | 74.38 |
| Bra011613.1-P | Field mustard | cytosol | 93.21 | 74.38 |
| Zm00001d013128_P004 | Maize | cytosol, plastid | 85.8 | 73.55 |
| GSMUA_Achr8P15550_001 | Banana | cytosol, mitochondrion | 83.95 | 69.39 |
| GSMUA_Achr3P24130_001 | Banana | cytosol, mitochondrion | 87.04 | 67.14 |
| KXG37427 | Sorghum | cytosol, nucleus, plastid | 88.89 | 53.73 |
| AT1G47830.1 | Thale cress | mitochondrion | 46.91 | 53.52 |
| GSMUA_Achr9P11170_001 | Banana | extracellular | 85.19 | 50.74 |
| Zm00001d034337_P005 | Maize | cytosol | 89.51 | 46.18 |
| AT2G19790.1 | Thale cress | mitochondrion | 35.8 | 40.56 |
| AT3G50860.1 | Thale cress | cytosol | 33.95 | 33.13 |
Protein Annotations
| MapMan:22.1.2.4 | Gene3D:3.30.450.60 | EntrezGene:829694 | ProteinID:AAB96889.1 | ProteinID:AEE86507.1 | EMBL:AK119004 |
| InterPro:AP_complex_ssu | InterPro:AP_mu_sigma_su | ArrayExpress:AT4G35410 | EnsemblPlantsGene:AT4G35410 | RefSeq:AT4G35410 | TAIR:AT4G35410 |
| RefSeq:AT4G35410-TAIR-G | EnsemblPlants:AT4G35410.2 | TAIR:AT4G35410.2 | EMBL:AY086242 | EMBL:BT004964 | ProteinID:CAA18728.1 |
| ProteinID:CAB80258.1 | InterPro:Clathrin_sm-chain_CS | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 |
| GO:GO:0008565 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030117 | GO:GO:0030665 |
| GO:GO:0031410 | InterPro:Longin-like_dom_sf | RefSeq:NP_195267.1 | UniProt:O23685 | PFAM:PF01217 | PIRSF:PIRSF015588 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| ScanProsite:PS00989 | PANTHER:PTHR11753 | PANTHER:PTHR11753:SF32 | SUPFAM:SSF64356 | UniParc:UPI000000C51D | : |
Description
AAP19-2AP-1 complex subunit sigma-2 [Source:UniProtKB/Swiss-Prot;Acc:O23685]
Coordinates
chr4:+:16832339..16834002
Molecular Weight (calculated)
18914.9 Da
IEP (calculated)
7.445
GRAVY (calculated)
-0.076
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MIHFVLLVSR QGKVRLTKWY SPYAQKERSK VIRELSGVIL NRGPKLCNFV EWRGYKVVYK RYASLYFCMC IDQEDNELEV LEIIHHYVEI LDRYFGSVCE
101: LDLIFNFHKA YYILDELLIA GELQESSKKT VARIISAQDQ LVEVAKEEAS SISNIIAQAT NR
101: LDLIFNFHKA YYILDELLIA GELQESSKKT VARIISAQDQ LVEVAKEEAS SISNIIAQAT NR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.