Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- plasma membrane 1
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039020.1-P | Field mustard | mitochondrion | 100.0 | 100.0 |
| CDX82722 | Canola | mitochondrion | 100.0 | 99.31 |
| CDY35888 | Canola | mitochondrion | 100.0 | 99.31 |
| Bra036702.1-P | Field mustard | mitochondrion | 99.3 | 99.3 |
| CDY03335 | Canola | mitochondrion | 99.3 | 99.3 |
| CDY48729 | Canola | mitochondrion | 99.3 | 99.3 |
| Solyc05g026130.2.1 | Tomato | plastid | 93.71 | 93.71 |
| PGSC0003DMT400074468 | Potato | mitochondrion | 93.71 | 93.71 |
| KRH49010 | Soybean | mitochondrion | 93.71 | 93.71 |
| KRH74193 | Soybean | mitochondrion | 93.71 | 93.71 |
| VIT_11s0016g02840.t01 | Wine grape | cytosol, mitochondrion | 88.11 | 92.65 |
| GSMUA_Achr4P10500_001 | Banana | mitochondrion | 91.61 | 90.97 |
| TraesCS6A01G113800.1 | Wheat | cytosol, mitochondrion | 88.81 | 88.81 |
| TraesCS6B01G140700.1 | Wheat | cytosol, mitochondrion | 88.81 | 88.81 |
| TraesCS6D01G101600.1 | Wheat | cytosol, mitochondrion | 88.81 | 88.81 |
| KXG25094 | Sorghum | cytosol, mitochondrion | 88.11 | 88.11 |
| Zm00001d050256_P001 | Maize | cytosol, mitochondrion | 88.11 | 88.11 |
| Os08t0395300-01 | Rice | cytosol, mitochondrion | 87.41 | 87.41 |
| Os10t0368400-01 | Rice | cytosol, mitochondrion | 86.01 | 86.01 |
| KRH60179 | Soybean | cytosol | 45.45 | 72.22 |
| AT1G47830.1 | Thale cress | mitochondrion | 45.45 | 45.77 |
| AT2G17380.1 | Thale cress | cytosol, mitochondrion | 40.56 | 36.02 |
| AT4G35410.2 | Thale cress | mitochondrion | 40.56 | 35.8 |
| AT3G50860.1 | Thale cress | cytosol | 38.46 | 33.13 |
Protein Annotations
| MapMan:22.5.2.2.4 | Gene3D:3.30.450.60 | EntrezGene:816498 | ProteinID:AAC62137.1 | ProteinID:AEC06926.1 | EMBL:AF370185 |
| InterPro:AP_complex_ssu | InterPro:AP_mu_sigma_su | ArrayExpress:AT2G19790 | EnsemblPlantsGene:AT2G19790 | RefSeq:AT2G19790 | TAIR:AT2G19790 |
| RefSeq:AT2G19790-TAIR-G | EnsemblPlants:AT2G19790.1 | TAIR:AT2G19790.1 | EMBL:AY059143 | EMBL:AY088273 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0005905 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0008565 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030124 | InterPro:Longin-like_dom_sf |
| RefSeq:NP_179569.1 | UniProt:O82201 | PFAM:PF01217 | PIRSF:PIRSF015588 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR11753 | PANTHER:PTHR11753:SF4 | SUPFAM:SSF64356 | UniParc:UPI00000AB2F4 |
Description
AP-4 complex subunit sigma [Source:UniProtKB/Swiss-Prot;Acc:O82201]
Coordinates
chr2:+:8527175..8528685
Molecular Weight (calculated)
16921.7 Da
IEP (calculated)
5.574
GRAVY (calculated)
-0.106
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIRFILMVN KQGQTRLAQY YEWLTLEERR ALEGEIVRKC LARNDQQCSF VEHRNYKIVY RRYASLFFMV GVDDDENELA ILEFIHLLVE TMDKHFGNVC
101: ELDIMFHLEK AHFMLEEMVM NGCIVETSKA NILSPIQLMD KAH
101: ELDIMFHLEK AHFMLEEMVM NGCIVETSKA NILSPIQLMD KAH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.