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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 2
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4B01G234400.1 Wheat cytosol 98.19 98.19
TraesCS4A01G078400.1 Wheat cytosol 98.19 98.19
Os03t0228400-01 Rice cytosol, mitochondrion 89.16 89.16
EER92601 Sorghum mitochondrion 86.75 86.75
Os01t0353600-00 Rice mitochondrion 86.14 86.14
Zm00001d047992_P006 Maize cytosol, mitochondrion 87.35 82.39
GSMUA_Achr8P26380_001 Banana cytosol, mitochondrion 76.51 76.51
VIT_04s0023g01770.t01 Wine grape cytosol, mitochondrion 71.08 71.52
Zm00001d004311_P001 Maize extracellular 33.73 69.14
KRH08275 Soybean cytosol, mitochondrion 66.87 66.87
Bra012884.1-P Field mustard cytosol 66.27 65.87
CDX90681 Canola cytosol 65.66 65.27
OQU84502 Sorghum mitochondrion 83.13 65.09
KRH69924 Soybean cytosol, mitochondrion 65.06 65.06
AT3G50860.1 Thale cress cytosol 65.06 65.06
Solyc02g085240.2.1 Tomato cytosol 65.06 64.67
PGSC0003DMT400009269 Potato cytosol 60.84 61.96
Solyc01g109640.2.1 Tomato cytosol 58.43 58.79
Zm00001d010247_P001 Maize extracellular 36.75 56.48
CDY28984 Canola cytosol 66.87 52.61
Bra036855.1-P Field mustard cytosol 27.11 50.0
PGSC0003DMT400001875 Potato cytosol 46.99 46.43
GSMUA_AchrUn_... Banana cytosol 48.19 44.44
CDX73778 Canola cytosol, endoplasmic reticulum, nucleus 33.73 39.44
TraesCS5D01G119700.1 Wheat mitochondrion 33.13 38.73
TraesCS5D01G430000.1 Wheat cytosol, mitochondrion 34.34 35.4
TraesCS6D01G101600.1 Wheat cytosol, mitochondrion 28.92 33.57
Zm00001d008712_P001 Maize extracellular 40.96 31.19
Zm00001d041448_P001 Maize plastid 43.37 25.35
Zm00001d042538_P001 Maize plastid 43.37 24.16
Protein Annotations
MapMan:22.1.5.4Gene3D:3.30.450.60InterPro:APS3InterPro:AP_complex_ssuInterPro:AP_mu_sigma_suInterPro:Clathrin_sm-chain_CS
ncoils:CoilGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0006810GO:GO:0006886GO:GO:0008150GO:GO:0008565GO:GO:0015031
GO:GO:0016020GO:GO:0016192GO:GO:0030117GO:GO:0030123InterPro:Longin-like_dom_sfPFAM:PF01217
PIRSF:PIRSF015588ScanProsite:PS00989PANTHER:PTHR11753PANTHER:PTHR11753:SF2SUPFAM:SSF64356EnsemblPlantsGene:TraesCS4D01G235600
EnsemblPlants:TraesCS4D01G235600.1:::::
Description
No Description!
Coordinates
chr4D:+:396740666..396743345
Molecular Weight (calculated)
18942.0 Da
IEP (calculated)
5.029
GRAVY (calculated)
0.086
Length
166 amino acids
Sequence
(BLAST)
001: MIQAVMVIST LGKPRLLKFY DFQDPEKHQE LVRGVFQLLS ARPEGVSNFV EADAIFGPGT RLVYKHLATL YFIFVFDSSE NELAMLDLVQ VFVETLNRCF
101: KNVCELDIVF NFNKLHTVLD EMILGGQVIE TSSEQIMKSV EEIARLEKQS STTSLIPKSI SERFSR
Best Arabidopsis Sequence Match ( AT3G50860.1 )
(BLAST)
001: MIKAVMMMNT QGKPRLAKFY DYLPVEKQQE LIRGVFSVLC SRPENVSNFL EIESLFGPDS RLVYKHYATL YFVLVFDGSE NELAMLDLIQ VLVETLDKCF
101: SNVCELDIVF NYSKMHAVLD EIVFGGQVLE TSSAEVMKAV EEISKLEAAS NSISLVPKSV SGWRGR
Arabidopsis Description
AP-3 complex subunit sigma [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ37]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.