Factsheet for Zm00001d041448_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
golgi 1
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008712_P001	Maize	extracellular	76.41	99.54
Zm00001d010247_P001	Maize	extracellular	35.92	94.44
Zm00001d004311_P001	Maize	extracellular	23.59	82.72
Zm00001d042538_P001	Maize	plastid	84.86	80.87
TraesCS4B01G234400.1	Wheat	cytosol	25.7	43.98
TraesCS4A01G078400.1	Wheat	cytosol	25.7	43.98
GSMUA_Achr8P26380_001	Banana	cytosol, mitochondrion	25.35	43.37
TraesCS4D01G235600.1	Wheat	cytosol	25.35	43.37
Os03t0228400-01	Rice	cytosol, mitochondrion	24.65	42.17
Zm00001d047992_P006	Maize	cytosol, mitochondrion	25.7	41.48
Os01t0353600-00	Rice	mitochondrion	23.59	40.36
VIT_04s0023g01770.t01	Wine grape	cytosol, mitochondrion	22.54	38.79
PGSC0003DMT400009269	Potato	cytosol	20.77	36.2
KRH69924	Soybean	cytosol, mitochondrion	21.13	36.14
KRH08275	Soybean	cytosol, mitochondrion	21.13	36.14
Solyc02g085240.2.1	Tomato	cytosol	21.13	35.93
AT3G50860.1	Thale cress	cytosol	20.42	34.94
Bra012884.1-P	Field mustard	cytosol	20.42	34.73
CDX90681	Canola	cytosol	20.07	34.13
GSMUA_AchrUn_...	Banana	cytosol	21.13	33.33
Solyc01g109640.2.1	Tomato	cytosol	19.01	32.73
CDY28984	Canola	cytosol	20.77	27.96
Zm00001d007270_P001	Maize	mitochondrion	13.38	26.76
Zm00001d050256_P001	Maize	cytosol, mitochondrion	13.38	26.57
Bra036855.1-P	Field mustard	cytosol	8.1	25.56
CDX73778	Canola	cytosol, endoplasmic reticulum, nucleus	11.97	23.94
PGSC0003DMT400001875	Potato	cytosol	14.08	23.81
Zm00001d041778_P006	Maize	cytosol, mitochondrion	13.03	23.72
Zm00001d013128_P004	Maize	cytosol, plastid	15.14	22.75
Zm00001d034595_P001	Maize	cytosol	13.03	20.79
Zm00001d034337_P005	Maize	cytosol	14.08	12.74

Protein Annotations

Gene3D:3.30.450.60	MapMan:50.4.3	UniProt:A0A1D6MW96	InterPro:AP_mu_sigma_su	InterPro:Aromatic_Lyase	InterPro:Clathrin_sm-chain_CS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016192
GO:GO:0016829	GO:GO:0030117	InterPro:L-Aspartase-like	InterPro:Longin-like_dom_sf	ProteinID:ONM33064.1	PFAM:PF00221
PFAM:PF01217	ScanProsite:PS00989	PANTHER:PTHR10362	PANTHER:PTHR10362:SF31	SUPFAM:SSF48557	SUPFAM:SSF64356
UniParc:UPI000844879F	EnsemblPlantsGene:Zm00001d041448	EnsemblPlants:Zm00001d041448_P001	EnsemblPlants:Zm00001d041448_T001	SEG:seg	:

Description

Phenylalanine ammonia-lyase 1

Coordinates

chr3:+:120543649..120546836

Molecular Weight (calculated)

31817.1 Da

IEP (calculated)

9.555

GRAVY (calculated)

-0.089

Length

284 amino acids

Sequence
(BLAST)

001: MAARPRPPQT PLRRKPPARP RPLQTPPDSG RRKPPRPQTH RTKSAPDALQ TPQTKPRVPV PKEGLAMVNS TAVGSGLAST VLFEANILAI LAEVLSAVFC
101: EVMNGKPEYI DHLTHKLKHH PGHIEAAAIM EHILEGNSFM KLAKKLGELD PLMKPKQDQS KTNLQSLMSA AIPNVIGWIA ISFAKGTKMV YKHLATLYFV
201: FVFDSSENEL AMLDLVQVFV ETLDRCFKNV CELDIIFNFN KVPYVHMILP FLSFYNRIVC LSRMQGFYPA ENSIYDSSIA CCMF

Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)

001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC

Arabidopsis Description

PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.