Subcellular Localization
min:
: max
Winner_takes_all: cytosol, mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- plasma membrane 1
- mitochondrion 3
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0353600-00 | Rice | mitochondrion | 94.58 | 94.58 |
| EER92601 | Sorghum | mitochondrion | 89.76 | 89.76 |
| TraesCS4B01G234400.1 | Wheat | cytosol | 89.76 | 89.76 |
| TraesCS4D01G235600.1 | Wheat | cytosol | 89.16 | 89.16 |
| TraesCS4A01G078400.1 | Wheat | cytosol | 89.16 | 89.16 |
| Zm00001d047992_P006 | Maize | cytosol, mitochondrion | 89.76 | 84.66 |
| GSMUA_Achr8P26380_001 | Banana | cytosol, mitochondrion | 75.3 | 75.3 |
| Zm00001d004311_P001 | Maize | extracellular | 34.94 | 71.6 |
| VIT_04s0023g01770.t01 | Wine grape | cytosol, mitochondrion | 70.48 | 70.91 |
| OQU84502 | Sorghum | mitochondrion | 86.14 | 67.45 |
| AT3G50860.1 | Thale cress | cytosol | 64.46 | 64.46 |
| KRH08275 | Soybean | cytosol, mitochondrion | 64.46 | 64.46 |
| KRH69924 | Soybean | cytosol, mitochondrion | 64.46 | 64.46 |
| Bra012884.1-P | Field mustard | cytosol | 64.46 | 64.07 |
| CDX90681 | Canola | cytosol | 63.86 | 63.47 |
| Solyc02g085240.2.1 | Tomato | cytosol | 63.25 | 62.87 |
| PGSC0003DMT400009269 | Potato | cytosol | 60.24 | 61.35 |
| Solyc01g109640.2.1 | Tomato | cytosol | 60.24 | 60.61 |
| Zm00001d010247_P001 | Maize | extracellular | 37.95 | 58.33 |
| CDY28984 | Canola | cytosol | 65.06 | 51.18 |
| Bra036855.1-P | Field mustard | cytosol | 27.11 | 50.0 |
| PGSC0003DMT400001875 | Potato | cytosol | 48.19 | 47.62 |
| GSMUA_AchrUn_... | Banana | cytosol | 46.99 | 43.33 |
| Os12t0207300-01 | Rice | plasma membrane | 36.14 | 42.25 |
| CDX73778 | Canola | cytosol, endoplasmic reticulum, nucleus | 33.73 | 39.44 |
| Os03t0783700-00 | Rice | plasma membrane | 36.75 | 37.89 |
| Os08t0395300-01 | Rice | cytosol, mitochondrion | 31.33 | 36.36 |
| Os10t0368400-01 | Rice | cytosol, mitochondrion | 30.12 | 34.97 |
| Zm00001d008712_P001 | Maize | extracellular | 39.76 | 30.28 |
| Zm00001d041448_P001 | Maize | plastid | 42.17 | 24.65 |
| Zm00001d042538_P001 | Maize | plastid | 42.17 | 23.49 |
Protein Annotations
| MapMan:22.1.5.4 | Gene3D:3.30.450.60 | EntrezGene:4332139 | ProteinID:ABF94766.1 | EMBL:AK103703 | InterPro:APS3 |
| InterPro:AP_complex_ssu | InterPro:AP_mu_sigma_su | ProteinID:BAF11365.1 | ProteinID:BAS83084.1 | InterPro:Clathrin_sm-chain_CS | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0008565 | GO:GO:0015031 | GO:GO:0016020 |
| GO:GO:0016192 | GO:GO:0030117 | GO:GO:0030123 | InterPro:Longin-like_dom_sf | EnsemblPlantsGene:Os03g0228400 | EnsemblPlants:Os03t0228400-01 |
| PFAM:PF01217 | PIRSF:PIRSF015588 | ScanProsite:PS00989 | PANTHER:PTHR11753 | PANTHER:PTHR11753:SF2 | UniProt:Q10PM8 |
| SUPFAM:SSF64356 | UniParc:UPI0000DB4CB3 | RefSeq:XP_015630869.1 | RefSeq:XP_015630871.1 | : | : |
Description
Similar to Adapter-related protein complex 3 sigma 2 subunit (Sigma-adaptin 3b) (AP-3 complex sigma-3B subunit) (Sigma-3B-adaptin). (Os03t0228400-01)
Coordinates
chr3:+:6782702..6785978
Molecular Weight (calculated)
18940.0 Da
IEP (calculated)
6.264
GRAVY (calculated)
0.051
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MIQAVMVMST QGKPRLLKFY SYQPPEKHQD LVRGVFQLLS ARPDSVSNFV KVDAIFGPGA KLVYKHLATL YFVFVFDSSE NELAVLDLVQ VFVETLDRCF
101: KNVCELDIVF NFNKLHTILD EMILGGQVIE TSSEQIMRSV EEIARLEKQS NTTSLIPKSI SERFSR
101: KNVCELDIVF NFNKLHTILD EMILGGQVIE TSSEQIMRSV EEIARLEKQS NTTSLIPKSI SERFSR
001: MIKAVMMMNT QGKPRLAKFY DYLPVEKQQE LIRGVFSVLC SRPENVSNFL EIESLFGPDS RLVYKHYATL YFVLVFDGSE NELAMLDLIQ VLVETLDKCF
101: SNVCELDIVF NYSKMHAVLD EIVFGGQVLE TSSAEVMKAV EEISKLEAAS NSISLVPKSV SGWRGR
101: SNVCELDIVF NYSKMHAVLD EIVFGGQVLE TSSAEVMKAV EEISKLEAAS NSISLVPKSV SGWRGR
Arabidopsis Description
AP-3 complex subunit sigma [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ37]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.