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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 3
  • mitochondrion 2
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus, plastid
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
MultiLoc:plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY15579 Canola plastid 43.16 80.92
CDY06642 Canola plastid 66.67 65.07
Bra015501.1-P Field mustard plastid 58.95 64.62
CDY10200 Canola mitochondrion, plastid 64.91 63.79
CDX86521 Canola plastid 60.35 59.52
Bra030653.1-P Field mustard plastid 63.16 54.22
Solyc07g055720.2.1 Tomato nucleus 34.74 41.6
VIT_12s0028g01390.t01 Wine grape cytosol, plastid 37.19 40.93
PGSC0003DMT400044530 Potato cytosol, nucleus, plastid 35.79 40.8
KRH14447 Soybean cytosol 35.79 39.08
KRH73706 Soybean cytosol 35.09 38.31
GSMUA_Achr3P03670_001 Banana plasma membrane 28.42 31.52
Protein Annotations
Gene3D:2.60.40.790MapMan:35.2EntrezGene:837158InterPro:A-crystallin/Hsp20_domSymbol:ACD32.1ProteinID:AEE27989.1
ArrayExpress:AT1G06460EnsemblPlantsGene:AT1G06460RefSeq:AT1G06460TAIR:AT1G06460RefSeq:AT1G06460-TAIR-GEnsemblPlants:AT1G06460.1
TAIR:AT1G06460.1Unigene:At.24926EMBL:BT025652EMBL:DQ403189GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005777InterPro:HSP20-like_chaperoneInterPro:IPR002068InterPro:IPR008978
RefSeq:NP_172134.1PFAM:PF00011PO:PO:0000013PO:PO:0000037PO:PO:0000084PO:PO:0000230
PO:PO:0000293PO:PO:0001016PO:PO:0001017PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025195PO:PO:0025281PFscan:PS01031
PANTHER:PTHR43670PANTHER:PTHR43670:SF5UniProt:Q208N7SUPFAM:SSF49764UniParc:UPI0000162C88SEG:seg
Description
ACD32.1Alpha-crystallin domain 32.1 [Source:UniProtKB/TrEMBL;Acc:Q208N7]
Coordinates
chr1:-:1967087..1969656
Molecular Weight (calculated)
31223.9 Da
IEP (calculated)
9.823
GRAVY (calculated)
-0.344
Length
285 amino acids
Sequence
(BLAST)
001: MEHESITARR RLAAFAAHFP ATSYDSASTA SLVPLNCSSS LNTVIQRCDN KISFARQASS EQGFFMRPAS PDDVLENLGM NLKNTVVRRG DNRLYFARQA
101: SSAQGFFMRQ ASTNERTIPH DAAASTKFSA TKTTGFDSSS PAYAAPHFSK PAKEDIFFPS LSPNLQKERP KLDLPKLANL GTVWSPRSNV AESTHSYVVA
201: IELPGASIND IRVEVDNTNL TVTGRRTSIC QKVDAGTKAS ILGYHKQEIL QGPFKVSWPL PSNVNKDNVS AEFMDGILRI VIPKL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.