Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06642 | Canola | plastid | 84.21 | 43.84 |
| AT1G06460.1 | Thale cress | nucleus, plastid | 80.92 | 43.16 |
| CDY10200 | Canola | mitochondrion, plastid | 82.24 | 43.1 |
| CDX86521 | Canola | plastid | 80.92 | 42.56 |
| Bra030653.1-P | Field mustard | plastid | 86.84 | 39.76 |
| VIT_12s0028g01390.t01 | Wine grape | cytosol, plastid | 53.29 | 31.27 |
| KRH73706 | Soybean | cytosol | 51.32 | 29.89 |
| KRH14447 | Soybean | cytosol | 50.66 | 29.5 |
| Solyc07g055720.2.1 | Tomato | nucleus | 46.05 | 29.41 |
| PGSC0003DMT400044530 | Potato | cytosol, nucleus, plastid | 47.37 | 28.8 |
| GSMUA_Achr3P03670_001 | Banana | plasma membrane | 38.16 | 22.57 |
Protein Annotations
| EnsemblPlants:CDY15579 | EnsemblPlantsGene:GSBRNA2T00089760001 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | InterPro:HSP20-like_chaperone | InterPro:IPR002068 |
| InterPro:IPR008978 | PANTHER:PTHR43670 | PANTHER:PTHR43670:SF5 | PFAM:PF00011 | PFscan:PS01031 | ProteinID:CDY15579 |
| ProteinID:CDY15579.1 | SUPFAM:SSF49764 | UniParc:UPI0004EE4F0A | UniProt:A0A078FRS9 | MapMan:35.2 | : |
Description
BnaA08g28630DBnaA08g28630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FRS9]
Coordinates
chrLK032055:-:600878..601951
Molecular Weight (calculated)
16701.1 Da
IEP (calculated)
9.417
GRAVY (calculated)
-0.139
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MELHSITARR RLATVAAHFP NDPVSTASLV PLNCSSSLNS VIRRCDSKLP FARQASSEQG FFMRQASTDE GLFGLRDQIV EVDNLNLIVT GRRTSVGQKV
101: DAGTKGSICG YQKQEILQGP FKVSWPLPIN VNKDNVSAEF MDGLLRIVIP KL
101: DAGTKGSICG YQKQEILQGP FKVSWPLPIN VNKDNVSAEF MDGLLRIVIP KL
001: MEHESITARR RLAAFAAHFP ATSYDSASTA SLVPLNCSSS LNTVIQRCDN KISFARQASS EQGFFMRPAS PDDVLENLGM NLKNTVVRRG DNRLYFARQA
101: SSAQGFFMRQ ASTNERTIPH DAAASTKFSA TKTTGFDSSS PAYAAPHFSK PAKEDIFFPS LSPNLQKERP KLDLPKLANL GTVWSPRSNV AESTHSYVVA
201: IELPGASIND IRVEVDNTNL TVTGRRTSIC QKVDAGTKAS ILGYHKQEIL QGPFKVSWPL PSNVNKDNVS AEFMDGILRI VIPKL
101: SSAQGFFMRQ ASTNERTIPH DAAASTKFSA TKTTGFDSSS PAYAAPHFSK PAKEDIFFPS LSPNLQKERP KLDLPKLANL GTVWSPRSNV AESTHSYVVA
201: IELPGASIND IRVEVDNTNL TVTGRRTSIC QKVDAGTKAS ILGYHKQEIL QGPFKVSWPL PSNVNKDNVS AEFMDGILRI VIPKL
Arabidopsis Description
ACD32.1Alpha-crystallin domain 32.1 [Source:UniProtKB/TrEMBL;Acc:Q208N7]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.