Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH73706 | Soybean | cytosol | 91.19 | 91.19 |
| VIT_12s0028g01390.t01 | Wine grape | cytosol, plastid | 50.57 | 50.97 |
| CDY15579 | Canola | plastid | 29.5 | 50.66 |
| Solyc07g055720.2.1 | Tomato | nucleus | 40.23 | 44.12 |
| PGSC0003DMT400044530 | Potato | cytosol, nucleus, plastid | 40.23 | 42.0 |
| GSMUA_Achr3P03670_001 | Banana | plasma membrane | 37.55 | 38.13 |
| Bra015501.1-P | Field mustard | plastid | 37.55 | 37.69 |
| CDY06642 | Canola | plastid | 41.76 | 37.33 |
| AT1G06460.1 | Thale cress | nucleus, plastid | 39.08 | 35.79 |
| CDY10200 | Canola | mitochondrion, plastid | 39.46 | 35.52 |
| CDX86521 | Canola | plastid | 37.93 | 34.26 |
| Bra030653.1-P | Field mustard | plastid | 39.08 | 30.72 |
Protein Annotations
| EMBL:ACUP02008502 | EnsemblPlants:KRH14447 | EnsemblPlantsGene:GLYMA_14G026100 | EntrezGene:100788166 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom |
| InterPro:HSP20-like_chaperone | InterPro:IPR002068 | InterPro:IPR008978 | PANTHER:PTHR43670 | PANTHER:PTHR43670:SF5 | PFAM:PF00011 |
| PFscan:PS01031 | ProteinID:KRH14447 | ProteinID:KRH14447.1 | SUPFAM:SSF49764 | UniParc:UPI000233BB32 | UniProt:I1M6V1 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr14:+:1869973..1873593
Molecular Weight (calculated)
28713.9 Da
IEP (calculated)
7.423
GRAVY (calculated)
-0.340
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MESESVKRRI HMIAAHFAPN DDISTTNVLP MNCSGSLNSV LRRCDNKVYF ARQASASLGY FMRQTSIEEG GSTSFIAPKT NHGAAASECP SDARAPCFAR
101: PAREESVFTN SVIQPMAREQ GSDFSTLDPP TFARPTRQIR GDQLHSEKKT GYSEIGGIEW SPRMDVAESE GKYVITVEVP GVSISDIRVE VDELKLCVKG
201: RRSTSSWTVA GCPNASFSSY HRREILYGPY GVVWPLPAGV NKDRISAEFL DGFLQIIVPK V
101: PAREESVFTN SVIQPMAREQ GSDFSTLDPP TFARPTRQIR GDQLHSEKKT GYSEIGGIEW SPRMDVAESE GKYVITVEVP GVSISDIRVE VDELKLCVKG
201: RRSTSSWTVA GCPNASFSSY HRREILYGPY GVVWPLPAGV NKDRISAEFL DGFLQIIVPK V
001: MEHESITARR RLAAFAAHFP ATSYDSASTA SLVPLNCSSS LNTVIQRCDN KISFARQASS EQGFFMRPAS PDDVLENLGM NLKNTVVRRG DNRLYFARQA
101: SSAQGFFMRQ ASTNERTIPH DAAASTKFSA TKTTGFDSSS PAYAAPHFSK PAKEDIFFPS LSPNLQKERP KLDLPKLANL GTVWSPRSNV AESTHSYVVA
201: IELPGASIND IRVEVDNTNL TVTGRRTSIC QKVDAGTKAS ILGYHKQEIL QGPFKVSWPL PSNVNKDNVS AEFMDGILRI VIPKL
101: SSAQGFFMRQ ASTNERTIPH DAAASTKFSA TKTTGFDSSS PAYAAPHFSK PAKEDIFFPS LSPNLQKERP KLDLPKLANL GTVWSPRSNV AESTHSYVVA
201: IELPGASIND IRVEVDNTNL TVTGRRTSIC QKVDAGTKAS ILGYHKQEIL QGPFKVSWPL PSNVNKDNVS AEFMDGILRI VIPKL
Arabidopsis Description
ACD32.1Alpha-crystallin domain 32.1 [Source:UniProtKB/TrEMBL;Acc:Q208N7]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.