Factsheet for AT1G76180.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008242.1-P	Field mustard	nucleus	81.08	77.32
CDY67724	Canola	nucleus	81.08	77.32
CDY68984	Canola	nucleus	80.54	76.8
Bra015779.1-P	Field mustard	cytosol	79.46	75.38
CDX87631	Canola	nucleus	78.38	74.36
CDX73240	Canola	cytosol	78.38	72.86
Bra003732.1-P	Field mustard	nucleus	75.68	72.16
CDX68109	Canola	nucleus	75.68	72.16
VIT_18s0001g00360.t01	Wine grape	cytosol	55.68	50.0
KRH60791	Soybean	endoplasmic reticulum	55.14	47.66
AT1G20450.1	Thale cress	nucleus	63.78	45.38
AT1G20440.1	Thale cress	cytosol	64.32	44.91
Solyc04g082200.2.1	Tomato	nucleus	49.19	44.17
PGSC0003DMT400025812	Potato	cytosol	46.49	41.15

Protein Annotations

MapMan:35.1	EntrezGene:843950	UniProt:A0A178WC69	ProteinID:AAF17644.1	ProteinID:AEE35806.1	ProteinID:AEE35807.1
EMBL:AF324699	EMBL:AF326904	EMBL:AF339722	EMBL:AF428362	EMBL:AK226910	ArrayExpress:AT1G76180
EnsemblPlantsGene:AT1G76180	RefSeq:AT1G76180	TAIR:AT1G76180	RefSeq:AT1G76180-TAIR-G	EnsemblPlants:AT1G76180.1	TAIR:AT1G76180.1
EMBL:AY039594	EMBL:AY054151	EMBL:AY054233	EMBL:AY086997	EMBL:D17715	InterPro:Dehydrin
InterPro:Dehydrin_CS	Symbol:ERD14	GO:GO:0001786	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005886
GO:GO:0006950	GO:GO:0008150	GO:GO:0008289	GO:GO:0009269	GO:GO:0009409	GO:GO:0009415
GO:GO:0009507	GO:GO:0009536	GO:GO:0009628	GO:GO:0009631	GO:GO:0009719	GO:GO:0009737
GO:GO:0016020	GO:GO:0019898	GO:GO:0031210	GO:GO:0050821	GO:GO:0090559	RefSeq:NP_001185408.1
RefSeq:NP_177745.1	ProteinID:OAP16027.1	UniProt:P42763	PFAM:PF00257	PO:PO:0000013	PO:PO:0000025
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001170	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007131	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009015
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	ScanProsite:PS00315	ScanProsite:PS00823	PANTHER:PTHR33346
PANTHER:PTHR33346:SF2	UniParc:UPI0000000B94	SEG:seg	:	:	:

Description

ERD14Dehydrin ERD14 [Source:UniProtKB/Swiss-Prot;Acc:P42763]

Coordinates

chr1:-:28586663..28587927

Molecular Weight (calculated)

20787.4 Da

IEP (calculated)

5.192

GRAVY (calculated)

-1.265

Length

185 amino acids

Sequence
(BLAST)

001: MAEEIKNVPE QEVPKVATEE SSAEVTDRGL FDFLGKKKDE TKPEETPIAS EFEQKVHISE PEPEVKHESL LEKLHRSDSS SSSSSEEEGS DGEKRKKKKE
101: KKKPTTEVEV KEEEKKGFME KLKEKLPGHK KPEDGSAVAA APVVVPPPVE EAHPVEKKGI LEKIKEKLPG YHPKTTVEEE KKDKE

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.