CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003732.1-P	Field mustard	nucleus	100.0	100.0
CDX87631	Canola	nucleus	83.51	83.08
CDX73240	Canola	cytosol	85.05	82.91
CDY67724	Canola	nucleus	80.41	80.41
CDY68984	Canola	nucleus	79.38	79.38
AT1G76180.1	Thale cress	nucleus	72.16	75.68
CDY01372	Canola	cytosol	60.31	53.18
CDY31888	Canola	cytosol	58.25	52.31
VIT_18s0001g00360.t01	Wine grape	cytosol	54.64	51.46
KRH60791	Soybean	endoplasmic reticulum	53.61	48.6
CDY31469	Canola	cytosol	61.34	43.91
Solyc04g082200.2.1	Tomato	nucleus	45.88	43.2
PGSC0003DMT400025812	Potato	cytosol	46.39	43.06

Protein Annotations

EnsemblPlants:CDX68109	EnsemblPlantsGene:GSBRNA2T00099351001	GO:A0A078BWD3	GO:GO:0006950	GO:GO:0008150	GO:GO:0009415
GO:GO:0009628	InterPro:Dehydrin	InterPro:Dehydrin_CS	PANTHER:PTHR33346	PANTHER:PTHR33346:SF2	PFAM:PF00257
ProteinID:CDX68109	ProteinID:CDX68109.1	ScanProsite:PS00315	ScanProsite:PS00823	SEG:seg	UniParc:UPI00025415BD
MapMan:35.2	:	:	:	:	:

Description

BnaA07g21490D

Coordinates

chrLK031787:+:3908317..3909335

Molecular Weight (calculated)

21756.4 Da

IEP (calculated)

5.337

GRAVY (calculated)

-1.308

Length

194 amino acids

Sequence
(BLAST)

001: MAEETKNVHE QEVPKVVMEE SSAATGEVTD RGMFDFLKKK KEETKPEETI NSEFEQKVQV SEPVPEVKHE EAEKKPSLLE KLHRSDSSSS SSSEEEGEDG
101: EKRKKKKKDK KKIATEGEVQ TEEAKKGFMD KLKEKLPGHG KKPEDDSAVA AAPVVAPPVE EAHPAEKKGI LEKIKEKLPG YHSKTVEEEK KDDH

Best Arabidopsis Sequence Match ( AT1G76180.1 )
(BLAST)

001: MAEEIKNVPE QEVPKVATEE SSAEVTDRGL FDFLGKKKDE TKPEETPIAS EFEQKVHISE PEPEVKHESL LEKLHRSDSS SSSSSEEEGS DGEKRKKKKE
101: KKKPTTEVEV KEEEKKGFME KLKEKLPGHK KPEDGSAVAA APVVVPPPVE EAHPVEKKGI LEKIKEKLPG YHPKTTVEEE KKDKE

Arabidopsis Description

ERD14Dehydrin ERD14 [Source:UniProtKB/Swiss-Prot;Acc:P42763]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.